Protein–RNA interactions for Protein: O55142

Rpl35a, 60S ribosomal protein L35a, mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpl35aO55142 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Rpl35aO55142 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Rpl35aO55142 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Rpl35aO55142 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Rpl35aO55142 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Rpl35aO55142 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Rpl35aO55142 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Rpl35aO55142 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Rpl35aO55142 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Rpl35aO55142 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC12.24□□□□□ -0.45
Rpl35aO55142 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
Rpl35aO55142 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Rpl35aO55142 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Rpl35aO55142 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC12.24□□□□□ -0.45
Rpl35aO55142 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Rpl35aO55142 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Rpl35aO55142 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Rpl35aO55142 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Rpl35aO55142 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Rpl35aO55142 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Rpl35aO55142 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Rpl35aO55142 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Rpl35aO55142 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Rpl35aO55142 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Rpl35aO55142 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Rpl35aO55142 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Rpl35aO55142 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Rpl35aO55142 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Rpl35aO55142 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Rpl35aO55142 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC12.23□□□□□ -0.45
Rpl35aO55142 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Rpl35aO55142 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Rpl35aO55142 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Rpl35aO55142 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Rpl35aO55142 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Rpl35aO55142 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Rpl35aO55142 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Rpl35aO55142 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Rpl35aO55142 Gm6190-201ENSMUST00000220683 1374 ntBASIC12.23□□□□□ -0.45
Rpl35aO55142 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Rpl35aO55142 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Rpl35aO55142 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Rpl35aO55142 Mir770-201ENSMUST00000103252 94 ntBASIC12.23□□□□□ -0.45
Rpl35aO55142 Gm13186-201ENSMUST00000118031 316 ntBASIC12.23□□□□□ -0.45
Rpl35aO55142 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Rpl35aO55142 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC12.23□□□□□ -0.45
Rpl35aO55142 Gm33142-201ENSMUST00000193913 867 ntBASIC12.23□□□□□ -0.45
Rpl35aO55142 Gm17808-201ENSMUST00000200859 894 ntBASIC12.23□□□□□ -0.45
Rpl35aO55142 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC12.23□□□□□ -0.45
Rpl35aO55142 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC12.23□□□□□ -0.45
Rpl35aO55142 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Rpl35aO55142 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Rpl35aO55142 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Rpl35aO55142 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Rpl35aO55142 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC12.23□□□□□ -0.45
Rpl35aO55142 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Rpl35aO55142 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Rpl35aO55142 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Rpl35aO55142 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Rpl35aO55142 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Rpl35aO55142 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Rpl35aO55142 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Rpl35aO55142 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Rpl35aO55142 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Rpl35aO55142 Gm43338-201ENSMUST00000198617 2223 ntBASIC12.22□□□□□ -0.45
Rpl35aO55142 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Rpl35aO55142 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Rpl35aO55142 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Rpl35aO55142 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Rpl35aO55142 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Rpl35aO55142 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Rpl35aO55142 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Rpl35aO55142 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Rpl35aO55142 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Rpl35aO55142 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Rpl35aO55142 AL590614.2-201ENSMUST00000225374 1937 ntBASIC12.22□□□□□ -0.45
Rpl35aO55142 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Rpl35aO55142 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Rpl35aO55142 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC12.22□□□□□ -0.45
Rpl35aO55142 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Rpl35aO55142 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Rpl35aO55142 Gm7284-201ENSMUST00000131667 944 ntBASIC12.22□□□□□ -0.45
Rpl35aO55142 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC12.22□□□□□ -0.45
Rpl35aO55142 Gm29518-201ENSMUST00000190858 372 ntBASIC12.22□□□□□ -0.45
Rpl35aO55142 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Rpl35aO55142 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Rpl35aO55142 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Rpl35aO55142 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Rpl35aO55142 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Rpl35aO55142 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Rpl35aO55142 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC12.22□□□□□ -0.45
Rpl35aO55142 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Rpl35aO55142 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Rpl35aO55142 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Rpl35aO55142 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Rpl35aO55142 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC12.22□□□□□ -0.45
Rpl35aO55142 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Rpl35aO55142 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Rpl35aO55142 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Rpl35aO55142 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 25.4 ms