Protein–RNA interactions for Protein: O55057

Pde6d, Retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit delta, mousemouse

Predictions only

Length 150 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6dO55057 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Pde6dO55057 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC13□□□□□ -0.33
Pde6dO55057 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC13□□□□□ -0.33
Pde6dO55057 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Pde6dO55057 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Pde6dO55057 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Pde6dO55057 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Pde6dO55057 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Pde6dO55057 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Pde6dO55057 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Pde6dO55057 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC13□□□□□ -0.33
Pde6dO55057 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Pde6dO55057 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Pde6dO55057 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Pde6dO55057 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC13□□□□□ -0.33
Pde6dO55057 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Pde6dO55057 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC13□□□□□ -0.33
Pde6dO55057 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC13□□□□□ -0.33
Pde6dO55057 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Pde6dO55057 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC13□□□□□ -0.33
Pde6dO55057 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Pde6dO55057 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Pde6dO55057 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Pde6dO55057 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Pde6dO55057 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Pde6dO55057 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Pde6dO55057 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Pde6dO55057 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Pde6dO55057 Tmem2-201ENSMUST00000025663 6585 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pde6dO55057 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pde6dO55057 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pde6dO55057 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pde6dO55057 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pde6dO55057 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pde6dO55057 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pde6dO55057 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pde6dO55057 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pde6dO55057 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Pde6dO55057 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pde6dO55057 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pde6dO55057 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pde6dO55057 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pde6dO55057 Gm12462-201ENSMUST00000140826 3056 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Pde6dO55057 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Pde6dO55057 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
Pde6dO55057 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC12.99□□□□□ -0.33
Pde6dO55057 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC12.99□□□□□ -0.33
Pde6dO55057 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC12.99□□□□□ -0.33
Pde6dO55057 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC12.99□□□□□ -0.33
Pde6dO55057 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Pde6dO55057 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pde6dO55057 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Pde6dO55057 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pde6dO55057 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Pde6dO55057 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pde6dO55057 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Pde6dO55057 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pde6dO55057 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pde6dO55057 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pde6dO55057 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pde6dO55057 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Pde6dO55057 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Pde6dO55057 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pde6dO55057 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Pde6dO55057 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pde6dO55057 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Pde6dO55057 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pde6dO55057 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pde6dO55057 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pde6dO55057 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pde6dO55057 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC12.98□□□□□ -0.33
Pde6dO55057 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pde6dO55057 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pde6dO55057 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Pde6dO55057 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Pde6dO55057 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pde6dO55057 Mir6349-201ENSMUST00000184059 97 ntBASIC12.98□□□□□ -0.33
Pde6dO55057 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pde6dO55057 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pde6dO55057 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC12.98□□□□□ -0.33
Pde6dO55057 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pde6dO55057 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pde6dO55057 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC12.98□□□□□ -0.33
Pde6dO55057 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pde6dO55057 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Pde6dO55057 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pde6dO55057 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC12.98□□□□□ -0.33
Pde6dO55057 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pde6dO55057 Ntrk2-205ENSMUST00000224402 2284 ntBASIC12.97□□□□□ -0.33
Pde6dO55057 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pde6dO55057 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Pde6dO55057 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Pde6dO55057 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pde6dO55057 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pde6dO55057 Ccdc166-201ENSMUST00000182172 2584 ntBASIC12.97□□□□□ -0.33
Pde6dO55057 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Pde6dO55057 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pde6dO55057 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Pde6dO55057 Gm43034-201ENSMUST00000198678 1364 ntBASIC12.97□□□□□ -0.33
Pde6dO55057 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 22.4 ms