Protein–RNA interactions for Protein: O55038

Cxcl13, C-X-C motif chemokine 13, mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl13O55038 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
Cxcl13O55038 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Cxcl13O55038 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Cxcl13O55038 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC13.86□□□□□ -0.19
Cxcl13O55038 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
Cxcl13O55038 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC13.86□□□□□ -0.19
Cxcl13O55038 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Cxcl13O55038 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Cxcl13O55038 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC13.86□□□□□ -0.19
Cxcl13O55038 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC13.86□□□□□ -0.19
Cxcl13O55038 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Cxcl13O55038 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Cxcl13O55038 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC13.86□□□□□ -0.19
Cxcl13O55038 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Cxcl13O55038 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Cxcl13O55038 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Cxcl13O55038 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC13.86□□□□□ -0.19
Cxcl13O55038 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
Cxcl13O55038 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Cxcl13O55038 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Cxcl13O55038 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Cxcl13O55038 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
Cxcl13O55038 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Cxcl13O55038 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Cxcl13O55038 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
Cxcl13O55038 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC13.85□□□□□ -0.19
Cxcl13O55038 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Cxcl13O55038 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Cxcl13O55038 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC13.85□□□□□ -0.19
Cxcl13O55038 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Cxcl13O55038 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Cxcl13O55038 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
Cxcl13O55038 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Cxcl13O55038 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
Cxcl13O55038 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC13.85□□□□□ -0.19
Cxcl13O55038 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Cxcl13O55038 Gm11452-201ENSMUST00000122376 690 ntBASIC13.85□□□□□ -0.19
Cxcl13O55038 Gm36967-201ENSMUST00000193814 266 ntBASIC13.85□□□□□ -0.19
Cxcl13O55038 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
Cxcl13O55038 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
Cxcl13O55038 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
Cxcl13O55038 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
Cxcl13O55038 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Cxcl13O55038 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Cxcl13O55038 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cxcl13O55038 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Cxcl13O55038 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cxcl13O55038 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Cxcl13O55038 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cxcl13O55038 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Cxcl13O55038 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC13.84□□□□□ -0.19
Cxcl13O55038 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Cxcl13O55038 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC13.84□□□□□ -0.19
Cxcl13O55038 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Cxcl13O55038 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC13.84□□□□□ -0.19
Cxcl13O55038 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cxcl13O55038 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cxcl13O55038 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Cxcl13O55038 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cxcl13O55038 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
Cxcl13O55038 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cxcl13O55038 Gm6598-201ENSMUST00000202719 2615 ntBASIC13.84□□□□□ -0.19
Cxcl13O55038 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cxcl13O55038 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Cxcl13O55038 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cxcl13O55038 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Cxcl13O55038 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Cxcl13O55038 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Cxcl13O55038 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Cxcl13O55038 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cxcl13O55038 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cxcl13O55038 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
Cxcl13O55038 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Cxcl13O55038 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cxcl13O55038 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cxcl13O55038 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cxcl13O55038 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cxcl13O55038 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Cxcl13O55038 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cxcl13O55038 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC13.83□□□□□ -0.2
Cxcl13O55038 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC13.83□□□□□ -0.2
Cxcl13O55038 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC13.83□□□□□ -0.2
Cxcl13O55038 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC13.83□□□□□ -0.2
Cxcl13O55038 AC160338.1-201ENSMUST00000214232 705 ntBASIC13.83□□□□□ -0.2
Cxcl13O55038 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cxcl13O55038 AC127349.1-201ENSMUST00000224590 266 ntBASIC13.83□□□□□ -0.2
Cxcl13O55038 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cxcl13O55038 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cxcl13O55038 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
Cxcl13O55038 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cxcl13O55038 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cxcl13O55038 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC13.83□□□□□ -0.2
Cxcl13O55038 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cxcl13O55038 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Cxcl13O55038 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cxcl13O55038 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cxcl13O55038 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cxcl13O55038 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cxcl13O55038 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
Cxcl13O55038 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 22.6 ms