Protein–RNA interactions for Protein: O55029

Copb2, Coatomer subunit beta', mousemouse

Predictions only

Length 905 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Copb2O55029 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Copb2O55029 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC18.82■□□□□ 0.6
Copb2O55029 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Copb2O55029 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC18.82■□□□□ 0.6
Copb2O55029 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Copb2O55029 Mir8098-201ENSMUST00000184011 137 ntBASIC18.82■□□□□ 0.6
Copb2O55029 AC164629.2-201ENSMUST00000217916 270 ntBASIC18.82■□□□□ 0.6
Copb2O55029 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC18.82■□□□□ 0.6
Copb2O55029 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Copb2O55029 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
Copb2O55029 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Copb2O55029 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC18.82■□□□□ 0.6
Copb2O55029 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Copb2O55029 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
Copb2O55029 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Copb2O55029 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Copb2O55029 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Copb2O55029 Gm36858-201ENSMUST00000194501 2391 ntBASIC18.81■□□□□ 0.6
Copb2O55029 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
Copb2O55029 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
Copb2O55029 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
Copb2O55029 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
Copb2O55029 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Copb2O55029 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC18.81■□□□□ 0.6
Copb2O55029 AC159301.1-201ENSMUST00000225130 1182 ntBASIC18.81■□□□□ 0.6
Copb2O55029 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Copb2O55029 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Copb2O55029 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Copb2O55029 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Copb2O55029 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Copb2O55029 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Copb2O55029 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Copb2O55029 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Copb2O55029 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
Copb2O55029 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Copb2O55029 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Copb2O55029 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Copb2O55029 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Copb2O55029 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Copb2O55029 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC18.8■□□□□ 0.6
Copb2O55029 Gm44771-201ENSMUST00000206975 626 ntBASIC18.8■□□□□ 0.6
Copb2O55029 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC18.8■□□□□ 0.6
Copb2O55029 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Copb2O55029 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Copb2O55029 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC18.8■□□□□ 0.6
Copb2O55029 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Copb2O55029 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Copb2O55029 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Copb2O55029 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC18.8■□□□□ 0.6
Copb2O55029 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Copb2O55029 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Copb2O55029 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Copb2O55029 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Copb2O55029 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Copb2O55029 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Copb2O55029 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Copb2O55029 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Copb2O55029 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Copb2O55029 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
Copb2O55029 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC18.79■□□□□ 0.6
Copb2O55029 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Copb2O55029 Gm15165-201ENSMUST00000118140 502 ntBASIC18.79■□□□□ 0.6
Copb2O55029 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Copb2O55029 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Copb2O55029 Gm44454-201ENSMUST00000198541 138 ntBASIC18.79■□□□□ 0.6
Copb2O55029 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Copb2O55029 CT009713.7-201ENSMUST00000224689 571 ntBASIC18.79■□□□□ 0.6
Copb2O55029 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Copb2O55029 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
Copb2O55029 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Copb2O55029 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Copb2O55029 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Copb2O55029 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Copb2O55029 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Copb2O55029 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Copb2O55029 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Copb2O55029 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
Copb2O55029 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Copb2O55029 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Copb2O55029 AC160338.1-201ENSMUST00000214232 705 ntBASIC18.78■□□□□ 0.6
Copb2O55029 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Copb2O55029 Gm16401-202ENSMUST00000197463 2074 ntBASIC18.78■□□□□ 0.6
Copb2O55029 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Copb2O55029 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Copb2O55029 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Copb2O55029 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC18.77■□□□□ 0.6
Copb2O55029 Gm15635-204ENSMUST00000208024 2539 ntBASIC18.77■□□□□ 0.6
Copb2O55029 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Copb2O55029 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Copb2O55029 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC18.77■□□□□ 0.6
Copb2O55029 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Copb2O55029 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
Copb2O55029 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Copb2O55029 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Copb2O55029 AC121598.2-201ENSMUST00000228376 2325 ntBASIC18.77■□□□□ 0.6
Copb2O55029 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Copb2O55029 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
Copb2O55029 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Copb2O55029 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Copb2O55029 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 23.8 ms