Protein–RNA interactions for Protein: O54990

Prom1, Prominin-1, mousemouse

Predictions only

Length 867 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prom1O54990 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Prom1O54990 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC18.05■□□□□ 0.48
Prom1O54990 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Prom1O54990 Gm7230-201ENSMUST00000173026 815 ntBASIC18.05■□□□□ 0.48
Prom1O54990 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC18.05■□□□□ 0.48
Prom1O54990 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC18.05■□□□□ 0.48
Prom1O54990 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC18.05■□□□□ 0.48
Prom1O54990 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Prom1O54990 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC18.05■□□□□ 0.48
Prom1O54990 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Prom1O54990 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Prom1O54990 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Prom1O54990 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
Prom1O54990 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Prom1O54990 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Prom1O54990 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Prom1O54990 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Prom1O54990 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
Prom1O54990 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Prom1O54990 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Prom1O54990 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC18.05■□□□□ 0.48
Prom1O54990 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
Prom1O54990 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Prom1O54990 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Prom1O54990 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Prom1O54990 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Prom1O54990 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Prom1O54990 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Prom1O54990 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Prom1O54990 Gm4995-201ENSMUST00000117247 432 ntBASIC18.04■□□□□ 0.48
Prom1O54990 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Prom1O54990 Gm11780-201ENSMUST00000136880 516 ntBASIC18.04■□□□□ 0.48
Prom1O54990 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC18.04■□□□□ 0.48
Prom1O54990 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC18.04■□□□□ 0.48
Prom1O54990 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC18.04■□□□□ 0.48
Prom1O54990 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC18.04■□□□□ 0.48
Prom1O54990 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC18.04■□□□□ 0.48
Prom1O54990 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC18.04■□□□□ 0.48
Prom1O54990 AC159093.1-201ENSMUST00000227779 380 ntBASIC18.04■□□□□ 0.48
Prom1O54990 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Prom1O54990 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Prom1O54990 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Prom1O54990 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
Prom1O54990 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Prom1O54990 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
Prom1O54990 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Prom1O54990 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Prom1O54990 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Prom1O54990 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC18.03■□□□□ 0.48
Prom1O54990 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Prom1O54990 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC18.03■□□□□ 0.48
Prom1O54990 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC18.03■□□□□ 0.48
Prom1O54990 Gm42670-201ENSMUST00000201816 1292 ntBASIC18.03■□□□□ 0.48
Prom1O54990 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Prom1O54990 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Prom1O54990 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Prom1O54990 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
Prom1O54990 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Prom1O54990 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Prom1O54990 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
Prom1O54990 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Prom1O54990 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC18.02■□□□□ 0.48
Prom1O54990 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
Prom1O54990 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
Prom1O54990 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
Prom1O54990 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC18.02■□□□□ 0.48
Prom1O54990 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Prom1O54990 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
Prom1O54990 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC18.02■□□□□ 0.48
Prom1O54990 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Prom1O54990 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC18.02■□□□□ 0.48
Prom1O54990 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC18.02■□□□□ 0.48
Prom1O54990 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Prom1O54990 Gm5264-201ENSMUST00000190584 848 ntBASIC18.02■□□□□ 0.48
Prom1O54990 Gm36967-201ENSMUST00000193814 266 ntBASIC18.02■□□□□ 0.48
Prom1O54990 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Prom1O54990 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Prom1O54990 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Prom1O54990 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Prom1O54990 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Prom1O54990 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Prom1O54990 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Prom1O54990 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
Prom1O54990 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC18.02■□□□□ 0.47
Prom1O54990 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Prom1O54990 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Prom1O54990 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Prom1O54990 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
Prom1O54990 Gm43702-201ENSMUST00000198772 2546 ntBASIC18.01■□□□□ 0.47
Prom1O54990 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC18.01■□□□□ 0.47
Prom1O54990 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC18.01■□□□□ 0.47
Prom1O54990 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Prom1O54990 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC18.01■□□□□ 0.47
Prom1O54990 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
Prom1O54990 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC18.01■□□□□ 0.47
Prom1O54990 Gm6089-201ENSMUST00000197666 938 ntBASIC18.01■□□□□ 0.47
Prom1O54990 Gm43073-201ENSMUST00000198200 1189 ntBASIC18.01■□□□□ 0.47
Prom1O54990 AC154222.1-201ENSMUST00000223882 475 ntBASIC18.01■□□□□ 0.47
Prom1O54990 Psmb5-202ENSMUST00000227257 622 ntBASIC18.01■□□□□ 0.47
Prom1O54990 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 26.2 ms