Protein–RNA interactions for Protein: O54941

Smarce1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1, mousemouse

Known RBP Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarce1O54941 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Smarce1O54941 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
Smarce1O54941 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Smarce1O54941 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Smarce1O54941 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Smarce1O54941 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Smarce1O54941 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Smarce1O54941 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC19.52■□□□□ 0.72
Smarce1O54941 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC19.52■□□□□ 0.72
Smarce1O54941 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC19.52■□□□□ 0.72
Smarce1O54941 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC19.52■□□□□ 0.72
Smarce1O54941 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
Smarce1O54941 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Smarce1O54941 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Smarce1O54941 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Smarce1O54941 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Smarce1O54941 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.71
Smarce1O54941 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC19.52■□□□□ 0.71
Smarce1O54941 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
Smarce1O54941 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Smarce1O54941 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Smarce1O54941 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Smarce1O54941 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Smarce1O54941 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Smarce1O54941 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Smarce1O54941 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Smarce1O54941 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Smarce1O54941 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC19.51■□□□□ 0.71
Smarce1O54941 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Smarce1O54941 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC19.51■□□□□ 0.71
Smarce1O54941 Gm21814-202ENSMUST00000203277 873 ntBASIC19.51■□□□□ 0.71
Smarce1O54941 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC19.51■□□□□ 0.71
Smarce1O54941 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Smarce1O54941 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Smarce1O54941 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Smarce1O54941 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Smarce1O54941 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Smarce1O54941 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Smarce1O54941 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
Smarce1O54941 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Smarce1O54941 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Smarce1O54941 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Smarce1O54941 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
Smarce1O54941 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
Smarce1O54941 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Smarce1O54941 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC19.5■□□□□ 0.71
Smarce1O54941 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Smarce1O54941 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Smarce1O54941 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC19.5■□□□□ 0.71
Smarce1O54941 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Smarce1O54941 Gm18115-201ENSMUST00000221209 621 ntBASIC19.5■□□□□ 0.71
Smarce1O54941 AC159205.3-201ENSMUST00000224614 874 ntBASIC19.5■□□□□ 0.71
Smarce1O54941 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Smarce1O54941 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Smarce1O54941 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Smarce1O54941 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC19.5■□□□□ 0.71
Smarce1O54941 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Smarce1O54941 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
Smarce1O54941 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Smarce1O54941 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Smarce1O54941 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Smarce1O54941 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Smarce1O54941 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Smarce1O54941 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Smarce1O54941 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Smarce1O54941 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
Smarce1O54941 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Smarce1O54941 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Smarce1O54941 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Smarce1O54941 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Smarce1O54941 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Smarce1O54941 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Smarce1O54941 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Smarce1O54941 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Smarce1O54941 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Smarce1O54941 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Smarce1O54941 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC19.49■□□□□ 0.71
Smarce1O54941 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC19.49■□□□□ 0.71
Smarce1O54941 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Smarce1O54941 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Smarce1O54941 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Smarce1O54941 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Smarce1O54941 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Smarce1O54941 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Smarce1O54941 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC19.48■□□□□ 0.71
Smarce1O54941 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC19.48■□□□□ 0.71
Smarce1O54941 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Smarce1O54941 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Smarce1O54941 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
Smarce1O54941 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Smarce1O54941 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Smarce1O54941 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Smarce1O54941 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Smarce1O54941 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Smarce1O54941 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Smarce1O54941 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Smarce1O54941 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Smarce1O54941 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Smarce1O54941 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Smarce1O54941 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC19.47■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 48.3 ms