Protein–RNA interactions for Protein: O54804

Chka, Choline kinase alpha, mousemouse

Predictions only

Length 453 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ChkaO54804 Gm43072-201ENSMUST00000200283 1671 ntBASIC16.59■□□□□ 0.25
ChkaO54804 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
ChkaO54804 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
ChkaO54804 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
ChkaO54804 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
ChkaO54804 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
ChkaO54804 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
ChkaO54804 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
ChkaO54804 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC16.59■□□□□ 0.25
ChkaO54804 Gm3272-201ENSMUST00000181181 1229 ntBASIC16.59■□□□□ 0.25
ChkaO54804 Gm30025-201ENSMUST00000218555 728 ntBASIC16.59■□□□□ 0.25
ChkaO54804 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
ChkaO54804 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
ChkaO54804 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
ChkaO54804 Gm10566-201ENSMUST00000086739 996 ntBASIC16.59■□□□□ 0.25
ChkaO54804 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
ChkaO54804 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
ChkaO54804 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
ChkaO54804 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
ChkaO54804 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
ChkaO54804 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
ChkaO54804 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC16.59■□□□□ 0.25
ChkaO54804 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC16.59■□□□□ 0.25
ChkaO54804 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
ChkaO54804 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
ChkaO54804 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
ChkaO54804 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC16.59■□□□□ 0.25
ChkaO54804 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
ChkaO54804 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC16.58■□□□□ 0.25
ChkaO54804 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.25
ChkaO54804 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.25
ChkaO54804 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
ChkaO54804 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
ChkaO54804 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC16.58■□□□□ 0.24
ChkaO54804 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
ChkaO54804 Gm44450-201ENSMUST00000199528 114 ntBASIC16.58■□□□□ 0.24
ChkaO54804 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
ChkaO54804 Zfp264-201ENSMUST00000208656 1563 ntBASIC16.58■□□□□ 0.24
ChkaO54804 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
ChkaO54804 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
ChkaO54804 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
ChkaO54804 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
ChkaO54804 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
ChkaO54804 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
ChkaO54804 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
ChkaO54804 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
ChkaO54804 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
ChkaO54804 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
ChkaO54804 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
ChkaO54804 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC16.57■□□□□ 0.24
ChkaO54804 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
ChkaO54804 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
ChkaO54804 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC16.57■□□□□ 0.24
ChkaO54804 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
ChkaO54804 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
ChkaO54804 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
ChkaO54804 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
ChkaO54804 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
ChkaO54804 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
ChkaO54804 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
ChkaO54804 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
ChkaO54804 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
ChkaO54804 Gm18115-201ENSMUST00000221209 621 ntBASIC16.57■□□□□ 0.24
ChkaO54804 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
ChkaO54804 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
ChkaO54804 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
ChkaO54804 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
ChkaO54804 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
ChkaO54804 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
ChkaO54804 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
ChkaO54804 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
ChkaO54804 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC16.57■□□□□ 0.24
ChkaO54804 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
ChkaO54804 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
ChkaO54804 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
ChkaO54804 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
ChkaO54804 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
ChkaO54804 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
ChkaO54804 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
ChkaO54804 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
ChkaO54804 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
ChkaO54804 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
ChkaO54804 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
ChkaO54804 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
ChkaO54804 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
ChkaO54804 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
ChkaO54804 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC16.56■□□□□ 0.24
ChkaO54804 Gm13436-201ENSMUST00000120418 567 ntBASIC16.56■□□□□ 0.24
ChkaO54804 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
ChkaO54804 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
ChkaO54804 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC16.56■□□□□ 0.24
ChkaO54804 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
ChkaO54804 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
ChkaO54804 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
ChkaO54804 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
ChkaO54804 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
ChkaO54804 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
ChkaO54804 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
ChkaO54804 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
ChkaO54804 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 38.6 ms