Protein–RNA interactions for Protein: O54788

Dffb, DNA fragmentation factor subunit beta, mousemouse

Known RBP Predictions only

Length 344 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DffbO54788 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC14.12□□□□□ -0.15
DffbO54788 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
DffbO54788 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
DffbO54788 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
DffbO54788 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
DffbO54788 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
DffbO54788 Gm12669-201ENSMUST00000122162 1009 ntBASIC14.12□□□□□ -0.15
DffbO54788 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
DffbO54788 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
DffbO54788 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC14.12□□□□□ -0.15
DffbO54788 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
DffbO54788 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
DffbO54788 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC14.12□□□□□ -0.15
DffbO54788 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
DffbO54788 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
DffbO54788 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
DffbO54788 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
DffbO54788 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
DffbO54788 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
DffbO54788 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
DffbO54788 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
DffbO54788 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
DffbO54788 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC14.12□□□□□ -0.15
DffbO54788 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
DffbO54788 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC14.12□□□□□ -0.15
DffbO54788 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
DffbO54788 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
DffbO54788 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
DffbO54788 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
DffbO54788 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
DffbO54788 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
DffbO54788 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
DffbO54788 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC14.11□□□□□ -0.15
DffbO54788 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
DffbO54788 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
DffbO54788 Gm7712-202ENSMUST00000222331 1510 ntBASIC14.11□□□□□ -0.15
DffbO54788 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
DffbO54788 Gm45212-201ENSMUST00000205831 3403 ntBASIC14.11□□□□□ -0.15
DffbO54788 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
DffbO54788 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
DffbO54788 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
DffbO54788 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
DffbO54788 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
DffbO54788 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
DffbO54788 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
DffbO54788 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
DffbO54788 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
DffbO54788 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
DffbO54788 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
DffbO54788 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
DffbO54788 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
DffbO54788 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
DffbO54788 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
DffbO54788 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
DffbO54788 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
DffbO54788 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
DffbO54788 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
DffbO54788 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
DffbO54788 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC14.11□□□□□ -0.15
DffbO54788 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
DffbO54788 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC14.11□□□□□ -0.15
DffbO54788 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
DffbO54788 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
DffbO54788 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC14.1□□□□□ -0.15
DffbO54788 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
DffbO54788 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
DffbO54788 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
DffbO54788 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
DffbO54788 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
DffbO54788 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC14.1□□□□□ -0.15
DffbO54788 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
DffbO54788 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
DffbO54788 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
DffbO54788 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
DffbO54788 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC14.1□□□□□ -0.15
DffbO54788 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
DffbO54788 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
DffbO54788 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
DffbO54788 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC14.1□□□□□ -0.15
DffbO54788 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC14.1□□□□□ -0.15
DffbO54788 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
DffbO54788 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
DffbO54788 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
DffbO54788 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
DffbO54788 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
DffbO54788 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
DffbO54788 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
DffbO54788 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
DffbO54788 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
DffbO54788 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
DffbO54788 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
DffbO54788 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
DffbO54788 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
DffbO54788 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
DffbO54788 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
DffbO54788 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC14.09□□□□□ -0.15
DffbO54788 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC14.09□□□□□ -0.15
DffbO54788 Gm38027-201ENSMUST00000192315 235 ntBASIC14.09□□□□□ -0.15
DffbO54788 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
DffbO54788 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 18.3 ms