Protein–RNA interactions for Protein: O54785

Limk2, LIM domain kinase 2, mousemouse

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Limk2O54785 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Limk2O54785 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC16.65■□□□□ 0.26
Limk2O54785 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Limk2O54785 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Limk2O54785 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC16.64■□□□□ 0.25
Limk2O54785 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC16.64■□□□□ 0.25
Limk2O54785 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Limk2O54785 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Limk2O54785 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
Limk2O54785 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Limk2O54785 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC16.64■□□□□ 0.25
Limk2O54785 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC16.64■□□□□ 0.25
Limk2O54785 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Limk2O54785 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Limk2O54785 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Limk2O54785 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Limk2O54785 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Limk2O54785 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
Limk2O54785 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC16.64■□□□□ 0.25
Limk2O54785 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
Limk2O54785 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Limk2O54785 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Limk2O54785 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Limk2O54785 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Limk2O54785 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Limk2O54785 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Limk2O54785 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
Limk2O54785 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Limk2O54785 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Limk2O54785 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Limk2O54785 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Limk2O54785 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Limk2O54785 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC16.63■□□□□ 0.25
Limk2O54785 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Limk2O54785 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Limk2O54785 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC16.63■□□□□ 0.25
Limk2O54785 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
Limk2O54785 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Limk2O54785 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Limk2O54785 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Limk2O54785 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Limk2O54785 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Limk2O54785 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Limk2O54785 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Limk2O54785 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC16.63■□□□□ 0.25
Limk2O54785 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Limk2O54785 Slc35b2-202ENSMUST00000223987 1766 ntBASIC16.63■□□□□ 0.25
Limk2O54785 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Limk2O54785 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC16.63■□□□□ 0.25
Limk2O54785 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Limk2O54785 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Limk2O54785 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC16.63■□□□□ 0.25
Limk2O54785 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Limk2O54785 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Limk2O54785 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Limk2O54785 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Limk2O54785 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Limk2O54785 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC16.62■□□□□ 0.25
Limk2O54785 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Limk2O54785 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Limk2O54785 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Limk2O54785 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Limk2O54785 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC16.62■□□□□ 0.25
Limk2O54785 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Limk2O54785 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Limk2O54785 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Limk2O54785 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Limk2O54785 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
Limk2O54785 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Limk2O54785 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC16.62■□□□□ 0.25
Limk2O54785 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Limk2O54785 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Limk2O54785 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Limk2O54785 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Limk2O54785 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC16.62■□□□□ 0.25
Limk2O54785 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC16.62■□□□□ 0.25
Limk2O54785 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Limk2O54785 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC16.62■□□□□ 0.25
Limk2O54785 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Limk2O54785 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Limk2O54785 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Limk2O54785 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Limk2O54785 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Limk2O54785 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Limk2O54785 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
Limk2O54785 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Limk2O54785 Gm24589-201ENSMUST00000116692 94 ntBASIC16.61■□□□□ 0.25
Limk2O54785 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Limk2O54785 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Limk2O54785 Spr-ps1-201ENSMUST00000089584 605 ntBASIC16.61■□□□□ 0.25
Limk2O54785 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
Limk2O54785 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
Limk2O54785 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Limk2O54785 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Limk2O54785 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Limk2O54785 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Limk2O54785 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Limk2O54785 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Limk2O54785 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Limk2O54785 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 63.4 ms