Protein–RNA interactions for Protein: O54751

Crx, Cone-rod homeobox protein, mousemouse

Predictions only

Length 299 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CrxO54751 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC12.05□□□□□ -0.48
CrxO54751 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
CrxO54751 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
CrxO54751 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
CrxO54751 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
CrxO54751 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC12.05□□□□□ -0.48
CrxO54751 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
CrxO54751 Stag1-206ENSMUST00000129269 6186 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
CrxO54751 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC12.05□□□□□ -0.48
CrxO54751 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC12.05□□□□□ -0.48
CrxO54751 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
CrxO54751 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
CrxO54751 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
CrxO54751 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
CrxO54751 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
CrxO54751 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC12.04□□□□□ -0.48
CrxO54751 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC12.04□□□□□ -0.48
CrxO54751 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
CrxO54751 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
CrxO54751 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC12.04□□□□□ -0.48
CrxO54751 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
CrxO54751 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC12.04□□□□□ -0.48
CrxO54751 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
CrxO54751 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
CrxO54751 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
CrxO54751 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
CrxO54751 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
CrxO54751 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC12.04□□□□□ -0.48
CrxO54751 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
CrxO54751 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
CrxO54751 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
CrxO54751 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC12.04□□□□□ -0.48
CrxO54751 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
CrxO54751 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
CrxO54751 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
CrxO54751 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
CrxO54751 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
CrxO54751 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
CrxO54751 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
CrxO54751 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
CrxO54751 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC12.04□□□□□ -0.48
CrxO54751 Larp4b-202ENSMUST00000188211 5610 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
CrxO54751 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
CrxO54751 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
CrxO54751 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC12.03□□□□□ -0.48
CrxO54751 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
CrxO54751 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
CrxO54751 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
CrxO54751 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
CrxO54751 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
CrxO54751 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
CrxO54751 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
CrxO54751 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
CrxO54751 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
CrxO54751 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
CrxO54751 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
CrxO54751 Etv6-202ENSMUST00000111963 5707 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
CrxO54751 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC12.03□□□□□ -0.48
CrxO54751 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
CrxO54751 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
CrxO54751 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
CrxO54751 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
CrxO54751 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
CrxO54751 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
CrxO54751 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
CrxO54751 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
CrxO54751 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
CrxO54751 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
CrxO54751 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
CrxO54751 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
CrxO54751 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC12.03□□□□□ -0.48
CrxO54751 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
CrxO54751 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC12.03□□□□□ -0.48
CrxO54751 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
CrxO54751 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
CrxO54751 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
CrxO54751 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.48
CrxO54751 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
CrxO54751 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
CrxO54751 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
CrxO54751 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
CrxO54751 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
CrxO54751 Gm43017-201ENSMUST00000198296 752 ntBASIC12.02□□□□□ -0.49
CrxO54751 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC12.02□□□□□ -0.49
CrxO54751 Gm45417-201ENSMUST00000209533 758 ntBASIC12.02□□□□□ -0.49
CrxO54751 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC12.02□□□□□ -0.49
CrxO54751 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC12.02□□□□□ -0.49
CrxO54751 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
CrxO54751 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
CrxO54751 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
CrxO54751 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
CrxO54751 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
CrxO54751 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
CrxO54751 Top2b-201ENSMUST00000017629 10335 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
CrxO54751 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
CrxO54751 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
CrxO54751 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
CrxO54751 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
CrxO54751 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
CrxO54751 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC12.02□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 36 ms