Protein–RNA interactions for Protein: O35600

Abca4, Retinal-specific ATP-binding cassette transporter, mousemouse

Predictions only

Length 2,310 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abca4O35600 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Abca4O35600 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Abca4O35600 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
Abca4O35600 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
Abca4O35600 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Abca4O35600 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Abca4O35600 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Abca4O35600 Mrpl53-201ENSMUST00000113938 695 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Abca4O35600 Gm6912-201ENSMUST00000117218 544 ntBASIC15.37■□□□□ 0.05
Abca4O35600 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Abca4O35600 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC15.37■□□□□ 0.05
Abca4O35600 Gm15494-202ENSMUST00000171665 451 ntTSL 2 BASIC15.37■□□□□ 0.05
Abca4O35600 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC15.37■□□□□ 0.05
Abca4O35600 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Abca4O35600 2610528J11Rik-201ENSMUST00000030261 958 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Abca4O35600 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC15.37■□□□□ 0.05
Abca4O35600 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Abca4O35600 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Abca4O35600 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Abca4O35600 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Abca4O35600 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC15.36■□□□□ 0.05
Abca4O35600 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC15.36■□□□□ 0.05
Abca4O35600 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Abca4O35600 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Abca4O35600 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
Abca4O35600 Gtpbp10-211ENSMUST00000198799 648 ntBASIC15.36■□□□□ 0.05
Abca4O35600 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Abca4O35600 Ifng-201ENSMUST00000068592 1208 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Abca4O35600 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Abca4O35600 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Abca4O35600 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Abca4O35600 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC15.36■□□□□ 0.05
Abca4O35600 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Abca4O35600 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Abca4O35600 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC15.36■□□□□ 0.05
Abca4O35600 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
Abca4O35600 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Abca4O35600 Best4-ps-201ENSMUST00000129783 1380 ntBASIC15.36■□□□□ 0.05
Abca4O35600 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC15.36■□□□□ 0.05
Abca4O35600 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Abca4O35600 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Abca4O35600 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Abca4O35600 Nmi-202ENSMUST00000112705 1130 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Abca4O35600 Ift27-201ENSMUST00000016781 1012 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Abca4O35600 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Abca4O35600 Gpr146-202ENSMUST00000053120 1040 ntBASIC15.35■□□□□ 0.05
Abca4O35600 Rtl8c-201ENSMUST00000063384 401 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
Abca4O35600 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Abca4O35600 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Abca4O35600 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Abca4O35600 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC15.35■□□□□ 0.05
Abca4O35600 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
Abca4O35600 AC159621.2-201ENSMUST00000223519 1326 ntBASIC15.35■□□□□ 0.05
Abca4O35600 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC15.35■□□□□ 0.05
Abca4O35600 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
Abca4O35600 2700012I20Rik-201ENSMUST00000180525 684 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Abca4O35600 Gm18062-201ENSMUST00000208020 547 ntBASIC15.35■□□□□ 0.05
Abca4O35600 Gm18055-201ENSMUST00000208254 547 ntBASIC15.35■□□□□ 0.05
Abca4O35600 Myog-201ENSMUST00000027730 1495 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Abca4O35600 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Abca4O35600 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Abca4O35600 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Abca4O35600 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Abca4O35600 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
Abca4O35600 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Abca4O35600 Coprs-202ENSMUST00000209371 601 ntTSL 3 BASIC15.34■□□□□ 0.05
Abca4O35600 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Abca4O35600 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Abca4O35600 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Abca4O35600 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Abca4O35600 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Abca4O35600 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
Abca4O35600 Lcn6-202ENSMUST00000114197 635 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Abca4O35600 Epo-201ENSMUST00000031723 715 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
Abca4O35600 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Abca4O35600 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Abca4O35600 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Abca4O35600 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Abca4O35600 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Abca4O35600 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Abca4O35600 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC15.33■□□□□ 0.05
Abca4O35600 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.05
Abca4O35600 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
Abca4O35600 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Abca4O35600 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Abca4O35600 Ghr-203ENSMUST00000110698 1171 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
Abca4O35600 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC15.33■□□□□ 0.05
Abca4O35600 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC15.33■□□□□ 0.05
Abca4O35600 Panct2-202ENSMUST00000188631 625 ntTSL 3 BASIC15.33■□□□□ 0.05
Abca4O35600 Apobec2-201ENSMUST00000046549 1218 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Abca4O35600 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Abca4O35600 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Abca4O35600 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Abca4O35600 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Abca4O35600 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
Abca4O35600 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC15.33■□□□□ 0.04
Abca4O35600 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
Abca4O35600 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Abca4O35600 Ppt2-202ENSMUST00000166040 1139 ntAPPRIS P1 TSL 3 BASIC15.33■□□□□ 0.04
Abca4O35600 Rpsa-ps10-201ENSMUST00000057740 885 ntBASIC15.33■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 35.5 ms