Protein–RNA interactions for Protein: O35491

Clk2, Dual specificity protein kinase CLK2, mousemouse

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clk2O35491 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC17.81■□□□□ 0.44
Clk2O35491 Gm1818-201ENSMUST00000169406 1184 ntBASIC17.81■□□□□ 0.44
Clk2O35491 Gm7507-201ENSMUST00000183053 1008 ntBASIC17.81■□□□□ 0.44
Clk2O35491 AC164629.2-201ENSMUST00000217916 270 ntBASIC17.81■□□□□ 0.44
Clk2O35491 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC17.81■□□□□ 0.44
Clk2O35491 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Clk2O35491 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Clk2O35491 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Clk2O35491 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Clk2O35491 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
Clk2O35491 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC17.8■□□□□ 0.44
Clk2O35491 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC17.8■□□□□ 0.44
Clk2O35491 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
Clk2O35491 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Clk2O35491 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
Clk2O35491 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Clk2O35491 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC17.8■□□□□ 0.44
Clk2O35491 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC17.8■□□□□ 0.44
Clk2O35491 Gm28659-201ENSMUST00000188013 759 ntBASIC17.8■□□□□ 0.44
Clk2O35491 AC133598.3-202ENSMUST00000224219 531 ntBASIC17.8■□□□□ 0.44
Clk2O35491 Cmtm5-203ENSMUST00000227441 610 ntBASIC17.8■□□□□ 0.44
Clk2O35491 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Clk2O35491 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
Clk2O35491 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Clk2O35491 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Clk2O35491 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Clk2O35491 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Clk2O35491 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Clk2O35491 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC17.79■□□□□ 0.44
Clk2O35491 Gm5864-201ENSMUST00000202263 970 ntBASIC17.79■□□□□ 0.44
Clk2O35491 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC17.79■□□□□ 0.44
Clk2O35491 AC160338.1-201ENSMUST00000214232 705 ntBASIC17.79■□□□□ 0.44
Clk2O35491 AC127349.1-201ENSMUST00000224590 266 ntBASIC17.79■□□□□ 0.44
Clk2O35491 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Clk2O35491 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC17.79■□□□□ 0.44
Clk2O35491 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
Clk2O35491 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Clk2O35491 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Clk2O35491 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Clk2O35491 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Clk2O35491 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Clk2O35491 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
Clk2O35491 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Clk2O35491 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
Clk2O35491 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Clk2O35491 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Clk2O35491 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Clk2O35491 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Clk2O35491 AC121598.2-201ENSMUST00000228376 2325 ntBASIC17.78■□□□□ 0.44
Clk2O35491 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Clk2O35491 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Clk2O35491 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
Clk2O35491 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Clk2O35491 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Clk2O35491 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Clk2O35491 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Clk2O35491 Mir8098-201ENSMUST00000184011 137 ntBASIC17.78■□□□□ 0.44
Clk2O35491 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC17.78■□□□□ 0.44
Clk2O35491 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC17.78■□□□□ 0.44
Clk2O35491 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC17.78■□□□□ 0.44
Clk2O35491 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Clk2O35491 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Clk2O35491 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
Clk2O35491 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Clk2O35491 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Clk2O35491 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Clk2O35491 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Clk2O35491 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC17.77■□□□□ 0.44
Clk2O35491 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC17.77■□□□□ 0.44
Clk2O35491 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC17.77■□□□□ 0.44
Clk2O35491 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Clk2O35491 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Clk2O35491 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
Clk2O35491 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Clk2O35491 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Clk2O35491 Gm13884-201ENSMUST00000118103 829 ntBASIC17.77■□□□□ 0.44
Clk2O35491 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC17.77■□□□□ 0.44
Clk2O35491 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC17.77■□□□□ 0.44
Clk2O35491 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Clk2O35491 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Clk2O35491 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Clk2O35491 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Clk2O35491 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.43
Clk2O35491 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Clk2O35491 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.43
Clk2O35491 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Clk2O35491 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Clk2O35491 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Clk2O35491 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Clk2O35491 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC17.76■□□□□ 0.43
Clk2O35491 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Clk2O35491 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Clk2O35491 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Clk2O35491 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC17.76■□□□□ 0.43
Clk2O35491 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Clk2O35491 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC17.76■□□□□ 0.43
Clk2O35491 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Clk2O35491 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Clk2O35491 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Clk2O35491 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 64 ms