Protein–RNA interactions for Protein: O35393

Efnb3, Ephrin-B3, mousemouse

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Efnb3O35393 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Efnb3O35393 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Efnb3O35393 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Efnb3O35393 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Efnb3O35393 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Efnb3O35393 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Efnb3O35393 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
Efnb3O35393 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Efnb3O35393 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Efnb3O35393 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Efnb3O35393 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Efnb3O35393 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Efnb3O35393 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Efnb3O35393 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC13.01□□□□□ -0.33
Efnb3O35393 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Efnb3O35393 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Efnb3O35393 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Efnb3O35393 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC13.01□□□□□ -0.33
Efnb3O35393 Gm27275-201ENSMUST00000184318 272 ntBASIC13.01□□□□□ -0.33
Efnb3O35393 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Efnb3O35393 Gm10517-202ENSMUST00000192970 758 ntBASIC13.01□□□□□ -0.33
Efnb3O35393 Gm42545-201ENSMUST00000202755 922 ntBASIC13.01□□□□□ -0.33
Efnb3O35393 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Efnb3O35393 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC13.01□□□□□ -0.33
Efnb3O35393 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Efnb3O35393 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Efnb3O35393 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Efnb3O35393 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Efnb3O35393 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Efnb3O35393 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Efnb3O35393 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Efnb3O35393 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Efnb3O35393 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Efnb3O35393 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC13□□□□□ -0.33
Efnb3O35393 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Efnb3O35393 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Efnb3O35393 Gm14026-201ENSMUST00000120625 1789 ntBASIC13□□□□□ -0.33
Efnb3O35393 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Efnb3O35393 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Efnb3O35393 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC13□□□□□ -0.33
Efnb3O35393 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC13□□□□□ -0.33
Efnb3O35393 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Efnb3O35393 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC13□□□□□ -0.33
Efnb3O35393 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Efnb3O35393 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Efnb3O35393 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC13□□□□□ -0.33
Efnb3O35393 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Efnb3O35393 Gm10653-202ENSMUST00000139570 835 ntBASIC13□□□□□ -0.33
Efnb3O35393 Gm8520-201ENSMUST00000186517 868 ntBASIC13□□□□□ -0.33
Efnb3O35393 Gm37025-201ENSMUST00000195159 829 ntBASIC13□□□□□ -0.33
Efnb3O35393 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Efnb3O35393 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
Efnb3O35393 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Efnb3O35393 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Efnb3O35393 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Efnb3O35393 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Efnb3O35393 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Efnb3O35393 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC13□□□□□ -0.33
Efnb3O35393 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Efnb3O35393 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Efnb3O35393 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Efnb3O35393 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Efnb3O35393 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Efnb3O35393 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Efnb3O35393 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC13□□□□□ -0.33
Efnb3O35393 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Efnb3O35393 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Efnb3O35393 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Efnb3O35393 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Efnb3O35393 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC12.99□□□□□ -0.33
Efnb3O35393 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Efnb3O35393 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Efnb3O35393 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC12.99□□□□□ -0.33
Efnb3O35393 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Efnb3O35393 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC12.99□□□□□ -0.33
Efnb3O35393 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Efnb3O35393 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Efnb3O35393 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Efnb3O35393 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Efnb3O35393 Gm12382-201ENSMUST00000122005 922 ntBASIC12.99□□□□□ -0.33
Efnb3O35393 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC12.99□□□□□ -0.33
Efnb3O35393 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC12.99□□□□□ -0.33
Efnb3O35393 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Efnb3O35393 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC12.99□□□□□ -0.33
Efnb3O35393 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Efnb3O35393 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Efnb3O35393 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Efnb3O35393 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Efnb3O35393 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Efnb3O35393 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Efnb3O35393 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Efnb3O35393 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC12.99□□□□□ -0.33
Efnb3O35393 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Efnb3O35393 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
Efnb3O35393 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC12.99□□□□□ -0.33
Efnb3O35393 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Efnb3O35393 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Efnb3O35393 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Efnb3O35393 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Efnb3O35393 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 27 ms