Protein–RNA interactions for Protein: O35206

Col15a1, Collagen alpha-1(XV) chain, mousemouse

Predictions only

Length 1,367 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col15a1O35206 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC20.96■□□□□ 0.95
Col15a1O35206 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
Col15a1O35206 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Col15a1O35206 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Col15a1O35206 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Col15a1O35206 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
Col15a1O35206 Prss22-201ENSMUST00000041649 1323 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Col15a1O35206 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Col15a1O35206 Gm8784-201ENSMUST00000222096 1435 ntBASIC20.96■□□□□ 0.95
Col15a1O35206 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Col15a1O35206 Gm11764-201ENSMUST00000120221 623 ntBASIC20.96■□□□□ 0.95
Col15a1O35206 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC20.96■□□□□ 0.95
Col15a1O35206 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC20.96■□□□□ 0.95
Col15a1O35206 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
Col15a1O35206 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Col15a1O35206 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Col15a1O35206 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
Col15a1O35206 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.95
Col15a1O35206 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Col15a1O35206 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC20.95■□□□□ 0.94
Col15a1O35206 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Col15a1O35206 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Col15a1O35206 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Col15a1O35206 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
Col15a1O35206 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Col15a1O35206 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Col15a1O35206 H2af-ps-201ENSMUST00000119066 295 ntBASIC20.95■□□□□ 0.94
Col15a1O35206 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC20.95■□□□□ 0.94
Col15a1O35206 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC20.95■□□□□ 0.94
Col15a1O35206 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC20.95■□□□□ 0.94
Col15a1O35206 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC20.95■□□□□ 0.94
Col15a1O35206 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
Col15a1O35206 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Col15a1O35206 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC20.95■□□□□ 0.94
Col15a1O35206 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
Col15a1O35206 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC20.95■□□□□ 0.94
Col15a1O35206 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
Col15a1O35206 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Col15a1O35206 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Col15a1O35206 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Col15a1O35206 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Col15a1O35206 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Col15a1O35206 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Col15a1O35206 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Col15a1O35206 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Col15a1O35206 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
Col15a1O35206 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC20.94■□□□□ 0.94
Col15a1O35206 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC20.94■□□□□ 0.94
Col15a1O35206 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC20.94■□□□□ 0.94
Col15a1O35206 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC20.94■□□□□ 0.94
Col15a1O35206 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC20.94■□□□□ 0.94
Col15a1O35206 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Col15a1O35206 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Col15a1O35206 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Col15a1O35206 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Col15a1O35206 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Col15a1O35206 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
Col15a1O35206 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Col15a1O35206 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Col15a1O35206 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Col15a1O35206 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
Col15a1O35206 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
Col15a1O35206 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
Col15a1O35206 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Col15a1O35206 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Col15a1O35206 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Col15a1O35206 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC20.93■□□□□ 0.94
Col15a1O35206 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
Col15a1O35206 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC20.93■□□□□ 0.94
Col15a1O35206 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC20.93■□□□□ 0.94
Col15a1O35206 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Col15a1O35206 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Col15a1O35206 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Col15a1O35206 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
Col15a1O35206 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
Col15a1O35206 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Col15a1O35206 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Col15a1O35206 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Col15a1O35206 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC20.92■□□□□ 0.94
Col15a1O35206 Mir3113-201ENSMUST00000175478 76 ntBASIC20.92■□□□□ 0.94
Col15a1O35206 AC151286.1-201ENSMUST00000198489 145 ntBASIC20.92■□□□□ 0.94
Col15a1O35206 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC20.92■□□□□ 0.94
Col15a1O35206 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Col15a1O35206 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC20.92■□□□□ 0.94
Col15a1O35206 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
Col15a1O35206 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Col15a1O35206 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Col15a1O35206 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Col15a1O35206 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Col15a1O35206 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
Col15a1O35206 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Col15a1O35206 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
Col15a1O35206 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Col15a1O35206 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Col15a1O35206 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC20.91■□□□□ 0.94
Col15a1O35206 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC20.91■□□□□ 0.94
Col15a1O35206 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Col15a1O35206 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC20.91■□□□□ 0.94
Col15a1O35206 Gm44945-201ENSMUST00000206764 1187 ntBASIC20.91■□□□□ 0.94
Col15a1O35206 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 24.7 ms