Protein–RNA interactions for Protein: O09111

Ndufb11, NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 11, mitochondrial, mousemouse

Predictions only

Length 151 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ndufb11O09111 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ndufb11O09111 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ndufb11O09111 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ndufb11O09111 Gm11960-202ENSMUST00000181063 2858 ntBASIC13.23□□□□□ -0.29
Ndufb11O09111 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ndufb11O09111 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ndufb11O09111 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ndufb11O09111 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Ndufb11O09111 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ndufb11O09111 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ndufb11O09111 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Ndufb11O09111 AC108858.1-201ENSMUST00000228461 1498 ntBASIC13.23□□□□□ -0.29
Ndufb11O09111 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ndufb11O09111 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Ndufb11O09111 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC13.22□□□□□ -0.29
Ndufb11O09111 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Ndufb11O09111 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Ndufb11O09111 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ndufb11O09111 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ndufb11O09111 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Ndufb11O09111 Celf3-201ENSMUST00000029784 2744 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ndufb11O09111 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ndufb11O09111 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ndufb11O09111 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC13.22□□□□□ -0.29
Ndufb11O09111 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ndufb11O09111 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ndufb11O09111 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Ndufb11O09111 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC13.22□□□□□ -0.29
Ndufb11O09111 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ndufb11O09111 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC13.22□□□□□ -0.29
Ndufb11O09111 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Ndufb11O09111 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ndufb11O09111 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Ndufb11O09111 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ndufb11O09111 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ndufb11O09111 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ndufb11O09111 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ndufb11O09111 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ndufb11O09111 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Ndufb11O09111 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ndufb11O09111 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ndufb11O09111 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ndufb11O09111 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ndufb11O09111 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ndufb11O09111 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ndufb11O09111 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ndufb11O09111 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ndufb11O09111 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ndufb11O09111 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Ndufb11O09111 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ndufb11O09111 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Ndufb11O09111 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Ndufb11O09111 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Ndufb11O09111 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Ndufb11O09111 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
Ndufb11O09111 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Ndufb11O09111 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Ndufb11O09111 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Ndufb11O09111 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Ndufb11O09111 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Ndufb11O09111 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Ndufb11O09111 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Ndufb11O09111 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Ndufb11O09111 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Ndufb11O09111 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC13.21□□□□□ -0.29
Ndufb11O09111 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC13.21□□□□□ -0.29
Ndufb11O09111 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Ndufb11O09111 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Ndufb11O09111 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Ndufb11O09111 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Ndufb11O09111 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
Ndufb11O09111 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Ndufb11O09111 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Ndufb11O09111 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
Ndufb11O09111 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC13.21□□□□□ -0.29
Ndufb11O09111 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.3
Ndufb11O09111 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Ndufb11O09111 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Ndufb11O09111 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.3
Ndufb11O09111 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Ndufb11O09111 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Ndufb11O09111 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Ndufb11O09111 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.3
Ndufb11O09111 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC13.21□□□□□ -0.3
Ndufb11O09111 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Ndufb11O09111 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Ndufb11O09111 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Ndufb11O09111 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ndufb11O09111 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ndufb11O09111 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Ndufb11O09111 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Ndufb11O09111 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Ndufb11O09111 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Ndufb11O09111 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ndufb11O09111 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC13.2□□□□□ -0.3
Ndufb11O09111 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC13.2□□□□□ -0.3
Ndufb11O09111 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC13.2□□□□□ -0.3
Ndufb11O09111 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ndufb11O09111 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Ndufb11O09111 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC13.2□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 25.1 ms