Protein–RNA interactions for Protein: O09106

Hdac1, Histone deacetylase 1, mousemouse

Known RBP Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdac1O09106 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Hdac1O09106 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Hdac1O09106 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Hdac1O09106 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Hdac1O09106 Shroom3-211ENSMUST00000225438 5742 ntBASIC19.55■□□□□ 0.72
Hdac1O09106 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC19.55■□□□□ 0.72
Hdac1O09106 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Hdac1O09106 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Hdac1O09106 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC19.55■□□□□ 0.72
Hdac1O09106 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC19.55■□□□□ 0.72
Hdac1O09106 Gm21814-202ENSMUST00000203277 873 ntBASIC19.55■□□□□ 0.72
Hdac1O09106 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC19.55■□□□□ 0.72
Hdac1O09106 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC19.55■□□□□ 0.72
Hdac1O09106 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Hdac1O09106 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Hdac1O09106 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Hdac1O09106 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Hdac1O09106 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Hdac1O09106 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Hdac1O09106 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
Hdac1O09106 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC19.54■□□□□ 0.72
Hdac1O09106 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
Hdac1O09106 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Hdac1O09106 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Hdac1O09106 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Hdac1O09106 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Hdac1O09106 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Hdac1O09106 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC19.54■□□□□ 0.72
Hdac1O09106 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Hdac1O09106 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
Hdac1O09106 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Hdac1O09106 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC19.54■□□□□ 0.72
Hdac1O09106 Gm4217-201ENSMUST00000182243 1002 ntBASIC19.54■□□□□ 0.72
Hdac1O09106 Gm36967-201ENSMUST00000193814 266 ntBASIC19.54■□□□□ 0.72
Hdac1O09106 AC154649.1-201ENSMUST00000227392 384 ntBASIC19.54■□□□□ 0.72
Hdac1O09106 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Hdac1O09106 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Hdac1O09106 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
Hdac1O09106 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
Hdac1O09106 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Hdac1O09106 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Hdac1O09106 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Hdac1O09106 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Hdac1O09106 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Hdac1O09106 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Hdac1O09106 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Hdac1O09106 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Hdac1O09106 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
Hdac1O09106 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC19.54■□□□□ 0.72
Hdac1O09106 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Hdac1O09106 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Hdac1O09106 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
Hdac1O09106 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Hdac1O09106 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Hdac1O09106 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC19.53■□□□□ 0.72
Hdac1O09106 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Hdac1O09106 Gm11539-201ENSMUST00000119837 557 ntBASIC19.53■□□□□ 0.72
Hdac1O09106 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Hdac1O09106 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC19.53■□□□□ 0.72
Hdac1O09106 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC19.53■□□□□ 0.72
Hdac1O09106 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC19.53■□□□□ 0.72
Hdac1O09106 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Hdac1O09106 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC19.52■□□□□ 0.72
Hdac1O09106 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Hdac1O09106 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Hdac1O09106 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Hdac1O09106 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
Hdac1O09106 Gm715-201ENSMUST00000117865 831 ntBASIC19.52■□□□□ 0.72
Hdac1O09106 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Hdac1O09106 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC19.52■□□□□ 0.72
Hdac1O09106 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Hdac1O09106 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Hdac1O09106 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Hdac1O09106 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Hdac1O09106 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Hdac1O09106 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Hdac1O09106 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Hdac1O09106 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
Hdac1O09106 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC19.51■□□□□ 0.71
Hdac1O09106 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Hdac1O09106 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Hdac1O09106 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Hdac1O09106 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Hdac1O09106 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Hdac1O09106 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
Hdac1O09106 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
Hdac1O09106 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Hdac1O09106 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC19.51■□□□□ 0.71
Hdac1O09106 Gm43353-201ENSMUST00000199224 1295 ntBASIC19.51■□□□□ 0.71
Hdac1O09106 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
Hdac1O09106 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Hdac1O09106 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
Hdac1O09106 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Hdac1O09106 Rbfox2-206ENSMUST00000227314 1810 ntBASIC19.51■□□□□ 0.71
Hdac1O09106 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Hdac1O09106 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Hdac1O09106 Gm44729-201ENSMUST00000206759 2052 ntBASIC19.5■□□□□ 0.71
Hdac1O09106 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Hdac1O09106 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Hdac1O09106 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 22.9 ms