Protein–RNA interactions for Protein: O08848

Trove2, 60 kDa SS-A/Ro ribonucleoprotein, mousemouse

Predictions only

Length 538 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trove2O08848 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
Trove2O08848 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Trove2O08848 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trove2O08848 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
Trove2O08848 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trove2O08848 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trove2O08848 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trove2O08848 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trove2O08848 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trove2O08848 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trove2O08848 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trove2O08848 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trove2O08848 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
Trove2O08848 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
Trove2O08848 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trove2O08848 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trove2O08848 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trove2O08848 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trove2O08848 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trove2O08848 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trove2O08848 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trove2O08848 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trove2O08848 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trove2O08848 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC16.87■□□□□ 0.29
Trove2O08848 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trove2O08848 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Trove2O08848 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trove2O08848 Gm43183-201ENSMUST00000200632 547 ntBASIC16.87■□□□□ 0.29
Trove2O08848 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC16.87■□□□□ 0.29
Trove2O08848 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trove2O08848 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trove2O08848 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
Trove2O08848 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trove2O08848 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
Trove2O08848 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
Trove2O08848 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Trove2O08848 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trove2O08848 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trove2O08848 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trove2O08848 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trove2O08848 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
Trove2O08848 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trove2O08848 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trove2O08848 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trove2O08848 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Trove2O08848 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
Trove2O08848 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trove2O08848 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Trove2O08848 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trove2O08848 Gm13168-201ENSMUST00000121771 632 ntBASIC16.86■□□□□ 0.29
Trove2O08848 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trove2O08848 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trove2O08848 Mib1-201ENSMUST00000052838 10231 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trove2O08848 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trove2O08848 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trove2O08848 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trove2O08848 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trove2O08848 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trove2O08848 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC16.86■□□□□ 0.29
Trove2O08848 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trove2O08848 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Trove2O08848 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trove2O08848 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trove2O08848 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Trove2O08848 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trove2O08848 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trove2O08848 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trove2O08848 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trove2O08848 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trove2O08848 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Trove2O08848 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trove2O08848 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trove2O08848 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trove2O08848 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC16.85■□□□□ 0.29
Trove2O08848 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Trove2O08848 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
Trove2O08848 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Trove2O08848 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Trove2O08848 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trove2O08848 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trove2O08848 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trove2O08848 AC133083.1-201ENSMUST00000221736 2209 ntBASIC16.85■□□□□ 0.29
Trove2O08848 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trove2O08848 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
Trove2O08848 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trove2O08848 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trove2O08848 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trove2O08848 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC16.84■□□□□ 0.29
Trove2O08848 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trove2O08848 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trove2O08848 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trove2O08848 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Trove2O08848 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
Trove2O08848 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trove2O08848 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Trove2O08848 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trove2O08848 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trove2O08848 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trove2O08848 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trove2O08848 Gm4974-201ENSMUST00000209974 875 ntBASIC16.84■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 29.4 ms