Protein–RNA interactions for Protein: H3BKP8

9930021J03Rik, RIKEN cDNA 9930021J03 gene, mousemouse

Predictions only

Length 2,027 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
9930021J03RikH3BKP8 Gm14859-201ENSMUST00000117752 357 ntBASIC15.32■□□□□ 0.04
9930021J03RikH3BKP8 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
9930021J03RikH3BKP8 Gm17807-201ENSMUST00000186869 298 ntBASIC15.32■□□□□ 0.04
9930021J03RikH3BKP8 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
9930021J03RikH3BKP8 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
9930021J03RikH3BKP8 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
9930021J03RikH3BKP8 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
9930021J03RikH3BKP8 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
9930021J03RikH3BKP8 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
9930021J03RikH3BKP8 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
9930021J03RikH3BKP8 Gm20628-201ENSMUST00000177363 3215 ntBASIC15.32■□□□□ 0.04
9930021J03RikH3BKP8 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
9930021J03RikH3BKP8 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
9930021J03RikH3BKP8 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
9930021J03RikH3BKP8 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
9930021J03RikH3BKP8 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
9930021J03RikH3BKP8 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
9930021J03RikH3BKP8 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
9930021J03RikH3BKP8 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
9930021J03RikH3BKP8 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
9930021J03RikH3BKP8 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC15.31■□□□□ 0.04
9930021J03RikH3BKP8 Gm28033-201ENSMUST00000184224 96 ntBASIC15.31■□□□□ 0.04
9930021J03RikH3BKP8 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
9930021J03RikH3BKP8 Otx2os1-206ENSMUST00000228153 787 ntBASIC15.31■□□□□ 0.04
9930021J03RikH3BKP8 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
9930021J03RikH3BKP8 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
9930021J03RikH3BKP8 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
9930021J03RikH3BKP8 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
9930021J03RikH3BKP8 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
9930021J03RikH3BKP8 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
9930021J03RikH3BKP8 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
9930021J03RikH3BKP8 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
9930021J03RikH3BKP8 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
9930021J03RikH3BKP8 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
9930021J03RikH3BKP8 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
9930021J03RikH3BKP8 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
9930021J03RikH3BKP8 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC15.31■□□□□ 0.04
9930021J03RikH3BKP8 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
9930021J03RikH3BKP8 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC15.31■□□□□ 0.04
9930021J03RikH3BKP8 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC15.31■□□□□ 0.04
9930021J03RikH3BKP8 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
9930021J03RikH3BKP8 AC159205.3-201ENSMUST00000224614 874 ntBASIC15.31■□□□□ 0.04
9930021J03RikH3BKP8 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
9930021J03RikH3BKP8 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
9930021J03RikH3BKP8 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
9930021J03RikH3BKP8 Gm15442-201ENSMUST00000117905 1527 ntBASIC15.3■□□□□ 0.04
9930021J03RikH3BKP8 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC15.3■□□□□ 0.04
9930021J03RikH3BKP8 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC15.3■□□□□ 0.04
9930021J03RikH3BKP8 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
9930021J03RikH3BKP8 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC15.3■□□□□ 0.04
9930021J03RikH3BKP8 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
9930021J03RikH3BKP8 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
9930021J03RikH3BKP8 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
9930021J03RikH3BKP8 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
9930021J03RikH3BKP8 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC15.3■□□□□ 0.04
9930021J03RikH3BKP8 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
9930021J03RikH3BKP8 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
9930021J03RikH3BKP8 Gm45244-201ENSMUST00000211328 2200 ntBASIC15.3■□□□□ 0.04
9930021J03RikH3BKP8 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
9930021J03RikH3BKP8 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
9930021J03RikH3BKP8 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
9930021J03RikH3BKP8 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC15.29■□□□□ 0.04
9930021J03RikH3BKP8 Gm6623-201ENSMUST00000173570 544 ntBASIC15.29■□□□□ 0.04
9930021J03RikH3BKP8 Gm29707-201ENSMUST00000196325 491 ntBASIC15.29■□□□□ 0.04
9930021J03RikH3BKP8 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
9930021J03RikH3BKP8 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
9930021J03RikH3BKP8 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
9930021J03RikH3BKP8 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
9930021J03RikH3BKP8 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC15.29■□□□□ 0.04
9930021J03RikH3BKP8 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC15.29■□□□□ 0.04
9930021J03RikH3BKP8 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
9930021J03RikH3BKP8 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
9930021J03RikH3BKP8 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
9930021J03RikH3BKP8 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
9930021J03RikH3BKP8 Gm8839-201ENSMUST00000121279 1645 ntBASIC15.29■□□□□ 0.04
9930021J03RikH3BKP8 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
9930021J03RikH3BKP8 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
9930021J03RikH3BKP8 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC15.29■□□□□ 0.04
9930021J03RikH3BKP8 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
9930021J03RikH3BKP8 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
9930021J03RikH3BKP8 Gm15794-201ENSMUST00000120182 631 ntBASIC15.29■□□□□ 0.04
9930021J03RikH3BKP8 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
9930021J03RikH3BKP8 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
9930021J03RikH3BKP8 Gm44430-201ENSMUST00000203376 995 ntBASIC15.29■□□□□ 0.04
9930021J03RikH3BKP8 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
9930021J03RikH3BKP8 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC15.29■□□□□ 0.04
9930021J03RikH3BKP8 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
9930021J03RikH3BKP8 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
9930021J03RikH3BKP8 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC15.28■□□□□ 0.04
9930021J03RikH3BKP8 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
9930021J03RikH3BKP8 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
9930021J03RikH3BKP8 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
9930021J03RikH3BKP8 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
9930021J03RikH3BKP8 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC15.28■□□□□ 0.04
9930021J03RikH3BKP8 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
9930021J03RikH3BKP8 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
9930021J03RikH3BKP8 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
9930021J03RikH3BKP8 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
9930021J03RikH3BKP8 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC15.28■□□□□ 0.04
9930021J03RikH3BKP8 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 21.1 ms