Protein–RNA interactions for Protein: F8VQB8

Npcd, Neuronal pentraxin chromo domain, mousemouse

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NpcdF8VQB8 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC19.71■□□□□ 0.75
NpcdF8VQB8 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
NpcdF8VQB8 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
NpcdF8VQB8 Msantd1-204ENSMUST00000212362 798 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
NpcdF8VQB8 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC19.71■□□□□ 0.75
NpcdF8VQB8 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
NpcdF8VQB8 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
NpcdF8VQB8 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
NpcdF8VQB8 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
NpcdF8VQB8 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
NpcdF8VQB8 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
NpcdF8VQB8 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
NpcdF8VQB8 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
NpcdF8VQB8 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
NpcdF8VQB8 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
NpcdF8VQB8 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
NpcdF8VQB8 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
NpcdF8VQB8 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
NpcdF8VQB8 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
NpcdF8VQB8 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
NpcdF8VQB8 Gm4913-201ENSMUST00000117075 1290 ntBASIC19.7■□□□□ 0.74
NpcdF8VQB8 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
NpcdF8VQB8 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC19.7■□□□□ 0.74
NpcdF8VQB8 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC19.7■□□□□ 0.74
NpcdF8VQB8 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC19.7■□□□□ 0.74
NpcdF8VQB8 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
NpcdF8VQB8 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
NpcdF8VQB8 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
NpcdF8VQB8 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
NpcdF8VQB8 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
NpcdF8VQB8 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC19.7■□□□□ 0.74
NpcdF8VQB8 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
NpcdF8VQB8 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC19.69■□□□□ 0.74
NpcdF8VQB8 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
NpcdF8VQB8 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
NpcdF8VQB8 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
NpcdF8VQB8 Ddx41-204ENSMUST00000224765 2199 ntBASIC19.69■□□□□ 0.74
NpcdF8VQB8 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC19.69■□□□□ 0.74
NpcdF8VQB8 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
NpcdF8VQB8 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC19.69■□□□□ 0.74
NpcdF8VQB8 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC19.69■□□□□ 0.74
NpcdF8VQB8 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC19.69■□□□□ 0.74
NpcdF8VQB8 AC159114.1-201ENSMUST00000220349 266 ntBASIC19.69■□□□□ 0.74
NpcdF8VQB8 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
NpcdF8VQB8 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
NpcdF8VQB8 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
NpcdF8VQB8 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
NpcdF8VQB8 Fcho2-208ENSMUST00000224992 2964 ntBASIC19.69■□□□□ 0.74
NpcdF8VQB8 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
NpcdF8VQB8 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
NpcdF8VQB8 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
NpcdF8VQB8 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
NpcdF8VQB8 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
NpcdF8VQB8 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
NpcdF8VQB8 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
NpcdF8VQB8 Gm7222-201ENSMUST00000117512 906 ntBASIC19.68■□□□□ 0.74
NpcdF8VQB8 Timm13-201ENSMUST00000020440 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
NpcdF8VQB8 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
NpcdF8VQB8 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
NpcdF8VQB8 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC19.68■□□□□ 0.74
NpcdF8VQB8 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
NpcdF8VQB8 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
NpcdF8VQB8 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
NpcdF8VQB8 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
NpcdF8VQB8 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
NpcdF8VQB8 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
NpcdF8VQB8 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
NpcdF8VQB8 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
NpcdF8VQB8 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
NpcdF8VQB8 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
NpcdF8VQB8 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
NpcdF8VQB8 Gm11780-201ENSMUST00000136880 516 ntBASIC19.67■□□□□ 0.74
NpcdF8VQB8 Lrrc3c-201ENSMUST00000142268 902 ntAPPRIS P1 TSL 3 BASIC19.67■□□□□ 0.74
NpcdF8VQB8 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC19.67■□□□□ 0.74
NpcdF8VQB8 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
NpcdF8VQB8 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
NpcdF8VQB8 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
NpcdF8VQB8 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
NpcdF8VQB8 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
NpcdF8VQB8 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
NpcdF8VQB8 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
NpcdF8VQB8 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
NpcdF8VQB8 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
NpcdF8VQB8 Wnt10b-204ENSMUST00000226655 1807 ntBASIC19.67■□□□□ 0.74
NpcdF8VQB8 Gm37500-201ENSMUST00000192059 1443 ntBASIC19.67■□□□□ 0.74
NpcdF8VQB8 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
NpcdF8VQB8 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
NpcdF8VQB8 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
NpcdF8VQB8 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
NpcdF8VQB8 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
NpcdF8VQB8 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
NpcdF8VQB8 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
NpcdF8VQB8 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
NpcdF8VQB8 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
NpcdF8VQB8 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
NpcdF8VQB8 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
NpcdF8VQB8 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
NpcdF8VQB8 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
NpcdF8VQB8 Gm12497-201ENSMUST00000138778 237 ntBASIC19.66■□□□□ 0.74
NpcdF8VQB8 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC19.66■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 47.5 ms