Protein–RNA interactions for Protein: F7BJK1

Pcdh1, Protocadherin 1 (Fragment), mousemouse

Predictions only

Length 1,077 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1F7BJK1 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Pcdh1F7BJK1 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Pcdh1F7BJK1 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Pcdh1F7BJK1 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pcdh1F7BJK1 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC14.8□□□□□ -0.04
Pcdh1F7BJK1 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Pcdh1F7BJK1 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pcdh1F7BJK1 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Pcdh1F7BJK1 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC14.8□□□□□ -0.04
Pcdh1F7BJK1 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC14.8□□□□□ -0.04
Pcdh1F7BJK1 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Pcdh1F7BJK1 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pcdh1F7BJK1 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pcdh1F7BJK1 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC14.8□□□□□ -0.04
Pcdh1F7BJK1 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Pcdh1F7BJK1 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pcdh1F7BJK1 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Pcdh1F7BJK1 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Pcdh1F7BJK1 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pcdh1F7BJK1 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pcdh1F7BJK1 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pcdh1F7BJK1 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
Pcdh1F7BJK1 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pcdh1F7BJK1 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pcdh1F7BJK1 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pcdh1F7BJK1 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pcdh1F7BJK1 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pcdh1F7BJK1 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pcdh1F7BJK1 St8sia6-201ENSMUST00000003509 7618 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pcdh1F7BJK1 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC14.8□□□□□ -0.04
Pcdh1F7BJK1 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC14.8□□□□□ -0.04
Pcdh1F7BJK1 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pcdh1F7BJK1 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pcdh1F7BJK1 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Pcdh1F7BJK1 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC14.79□□□□□ -0.04
Pcdh1F7BJK1 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Pcdh1F7BJK1 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC14.79□□□□□ -0.04
Pcdh1F7BJK1 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC14.79□□□□□ -0.04
Pcdh1F7BJK1 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC14.79□□□□□ -0.04
Pcdh1F7BJK1 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Pcdh1F7BJK1 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Pcdh1F7BJK1 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC14.79□□□□□ -0.04
Pcdh1F7BJK1 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Pcdh1F7BJK1 Gm15378-201ENSMUST00000121894 207 ntBASIC14.79□□□□□ -0.04
Pcdh1F7BJK1 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Pcdh1F7BJK1 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Pcdh1F7BJK1 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC14.79□□□□□ -0.04
Pcdh1F7BJK1 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Pcdh1F7BJK1 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC14.79□□□□□ -0.04
Pcdh1F7BJK1 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC14.79□□□□□ -0.04
Pcdh1F7BJK1 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Pcdh1F7BJK1 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Pcdh1F7BJK1 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Pcdh1F7BJK1 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Pcdh1F7BJK1 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC14.79□□□□□ -0.04
Pcdh1F7BJK1 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Pcdh1F7BJK1 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Pcdh1F7BJK1 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Pcdh1F7BJK1 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Pcdh1F7BJK1 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Pcdh1F7BJK1 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Pcdh1F7BJK1 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Pcdh1F7BJK1 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pcdh1F7BJK1 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pcdh1F7BJK1 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pcdh1F7BJK1 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC14.78□□□□□ -0.04
Pcdh1F7BJK1 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pcdh1F7BJK1 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pcdh1F7BJK1 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Pcdh1F7BJK1 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pcdh1F7BJK1 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pcdh1F7BJK1 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pcdh1F7BJK1 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pcdh1F7BJK1 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pcdh1F7BJK1 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Pcdh1F7BJK1 Gm5643-201ENSMUST00000117081 966 ntBASIC14.78□□□□□ -0.04
Pcdh1F7BJK1 Gm12085-201ENSMUST00000119263 940 ntBASIC14.78□□□□□ -0.04
Pcdh1F7BJK1 Gm10653-202ENSMUST00000139570 835 ntBASIC14.78□□□□□ -0.04
Pcdh1F7BJK1 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC14.78□□□□□ -0.04
Pcdh1F7BJK1 Gm38027-201ENSMUST00000192315 235 ntBASIC14.78□□□□□ -0.04
Pcdh1F7BJK1 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC14.78□□□□□ -0.04
Pcdh1F7BJK1 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pcdh1F7BJK1 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pcdh1F7BJK1 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pcdh1F7BJK1 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pcdh1F7BJK1 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pcdh1F7BJK1 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC14.78□□□□□ -0.04
Pcdh1F7BJK1 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Pcdh1F7BJK1 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Pcdh1F7BJK1 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC14.77□□□□□ -0.04
Pcdh1F7BJK1 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Pcdh1F7BJK1 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC14.77□□□□□ -0.04
Pcdh1F7BJK1 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Pcdh1F7BJK1 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Pcdh1F7BJK1 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Pcdh1F7BJK1 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC14.77□□□□□ -0.05
Pcdh1F7BJK1 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Pcdh1F7BJK1 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC14.77□□□□□ -0.05
Pcdh1F7BJK1 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC14.77□□□□□ -0.05
Pcdh1F7BJK1 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC14.77□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 34.8 ms