Protein–RNA interactions for Protein: F6ZDS4

Tpr, Nucleoprotein TPR, mousemouse

Known RBP Predictions only

Length 2,431 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TprF6ZDS4 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
TprF6ZDS4 AL590614.2-201ENSMUST00000225374 1937 ntBASIC15.04■□□□□ -0
TprF6ZDS4 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
TprF6ZDS4 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
TprF6ZDS4 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
TprF6ZDS4 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
TprF6ZDS4 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
TprF6ZDS4 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
TprF6ZDS4 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
TprF6ZDS4 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
TprF6ZDS4 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC15.04■□□□□ -0
TprF6ZDS4 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC15.04■□□□□ -0
TprF6ZDS4 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC15.04■□□□□ -0
TprF6ZDS4 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC15.04■□□□□ -0
TprF6ZDS4 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
TprF6ZDS4 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
TprF6ZDS4 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
TprF6ZDS4 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC15.03■□□□□ -0
TprF6ZDS4 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
TprF6ZDS4 Gm26917-202ENSMUST00000192833 3329 ntBASIC15.03■□□□□ -0
TprF6ZDS4 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC15.03■□□□□ -0
TprF6ZDS4 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
TprF6ZDS4 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
TprF6ZDS4 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC15.03■□□□□ -0
TprF6ZDS4 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC15.03■□□□□ -0
TprF6ZDS4 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC15.03■□□□□ -0
TprF6ZDS4 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC15.03■□□□□ -0
TprF6ZDS4 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
TprF6ZDS4 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
TprF6ZDS4 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC15.03■□□□□ -0
TprF6ZDS4 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
TprF6ZDS4 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC15.03■□□□□ -0
TprF6ZDS4 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
TprF6ZDS4 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC15.03■□□□□ -0
TprF6ZDS4 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
TprF6ZDS4 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
TprF6ZDS4 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
TprF6ZDS4 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
TprF6ZDS4 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC15.03■□□□□ -0
TprF6ZDS4 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
TprF6ZDS4 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
TprF6ZDS4 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
TprF6ZDS4 Gm11424-201ENSMUST00000121929 829 ntBASIC15.03■□□□□ -0
TprF6ZDS4 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC15.03■□□□□ -0
TprF6ZDS4 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC15.03■□□□□ -0
TprF6ZDS4 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
TprF6ZDS4 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
TprF6ZDS4 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
TprF6ZDS4 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
TprF6ZDS4 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC15.02■□□□□ -0
TprF6ZDS4 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC15.02■□□□□ -0
TprF6ZDS4 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC15.02■□□□□ -0
TprF6ZDS4 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
TprF6ZDS4 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
TprF6ZDS4 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
TprF6ZDS4 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
TprF6ZDS4 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC15.02■□□□□ -0
TprF6ZDS4 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC15.02■□□□□ -0
TprF6ZDS4 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
TprF6ZDS4 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
TprF6ZDS4 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC15.02■□□□□ -0
TprF6ZDS4 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
TprF6ZDS4 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
TprF6ZDS4 Anapc15-204ENSMUST00000106973 650 ntAPPRIS P1 TSL 2 BASIC15.02□□□□□ -0.01
TprF6ZDS4 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
TprF6ZDS4 Gm13036-201ENSMUST00000117799 748 ntBASIC15.02□□□□□ -0.01
TprF6ZDS4 Gm12260-201ENSMUST00000122447 411 ntBASIC15.02□□□□□ -0.01
TprF6ZDS4 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
TprF6ZDS4 2410080I02Rik-201ENSMUST00000142712 414 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
TprF6ZDS4 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
TprF6ZDS4 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC15.02□□□□□ -0.01
TprF6ZDS4 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
TprF6ZDS4 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC15.01□□□□□ -0.01
TprF6ZDS4 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TprF6ZDS4 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC15.01□□□□□ -0.01
TprF6ZDS4 AC154222.1-201ENSMUST00000223882 475 ntBASIC15.01□□□□□ -0.01
TprF6ZDS4 Rbfox2-207ENSMUST00000227533 1041 ntBASIC15.01□□□□□ -0.01
TprF6ZDS4 Trappc4-201ENSMUST00000034623 1220 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TprF6ZDS4 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TprF6ZDS4 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
TprF6ZDS4 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC15.01□□□□□ -0.01
TprF6ZDS4 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TprF6ZDS4 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
TprF6ZDS4 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TprF6ZDS4 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TprF6ZDS4 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TprF6ZDS4 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
TprF6ZDS4 Dusp13-203ENSMUST00000120956 1070 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
TprF6ZDS4 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
TprF6ZDS4 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TprF6ZDS4 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
TprF6ZDS4 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
TprF6ZDS4 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TprF6ZDS4 Gm35911-201ENSMUST00000198837 677 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
TprF6ZDS4 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
TprF6ZDS4 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
TprF6ZDS4 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
TprF6ZDS4 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC15□□□□□ -0.01
TprF6ZDS4 Gm12689-201ENSMUST00000094955 1359 ntAPPRIS P1 BASIC15□□□□□ -0.01
TprF6ZDS4 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 30.8 ms