Protein–RNA interactions for Protein: E9Q735

Ube4a, Ubiquitin conjugation factor E4 A, mousemouse

Predictions only

Length 1,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube4aE9Q735 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
Ube4aE9Q735 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
Ube4aE9Q735 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
Ube4aE9Q735 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ube4aE9Q735 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Ube4aE9Q735 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ube4aE9Q735 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
Ube4aE9Q735 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ube4aE9Q735 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC19.67■□□□□ 0.74
Ube4aE9Q735 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ube4aE9Q735 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ube4aE9Q735 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ube4aE9Q735 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC19.67■□□□□ 0.74
Ube4aE9Q735 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC19.67■□□□□ 0.74
Ube4aE9Q735 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ube4aE9Q735 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ube4aE9Q735 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ube4aE9Q735 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ube4aE9Q735 Gm5837-201ENSMUST00000191844 1369 ntBASIC19.67■□□□□ 0.74
Ube4aE9Q735 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC19.67■□□□□ 0.74
Ube4aE9Q735 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ube4aE9Q735 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC19.67■□□□□ 0.74
Ube4aE9Q735 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ube4aE9Q735 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Ube4aE9Q735 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ube4aE9Q735 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC19.66■□□□□ 0.74
Ube4aE9Q735 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ube4aE9Q735 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ube4aE9Q735 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
Ube4aE9Q735 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ube4aE9Q735 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ube4aE9Q735 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC19.66■□□□□ 0.74
Ube4aE9Q735 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Ube4aE9Q735 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC19.66■□□□□ 0.74
Ube4aE9Q735 Gm6089-201ENSMUST00000197666 938 ntBASIC19.66■□□□□ 0.74
Ube4aE9Q735 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC19.66■□□□□ 0.74
Ube4aE9Q735 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ube4aE9Q735 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ube4aE9Q735 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ube4aE9Q735 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC19.66■□□□□ 0.74
Ube4aE9Q735 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
Ube4aE9Q735 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ube4aE9Q735 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Ube4aE9Q735 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Ube4aE9Q735 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Ube4aE9Q735 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Ube4aE9Q735 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC19.65■□□□□ 0.74
Ube4aE9Q735 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Ube4aE9Q735 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Ube4aE9Q735 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Ube4aE9Q735 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Ube4aE9Q735 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Ube4aE9Q735 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC19.65■□□□□ 0.74
Ube4aE9Q735 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Ube4aE9Q735 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC19.65■□□□□ 0.74
Ube4aE9Q735 AC154757.1-201ENSMUST00000228289 336 ntBASIC19.65■□□□□ 0.74
Ube4aE9Q735 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC19.65■□□□□ 0.74
Ube4aE9Q735 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Ube4aE9Q735 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Ube4aE9Q735 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Ube4aE9Q735 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC19.65■□□□□ 0.74
Ube4aE9Q735 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Ube4aE9Q735 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC19.65■□□□□ 0.74
Ube4aE9Q735 AC154527.4-201ENSMUST00000224364 1667 ntBASIC19.65■□□□□ 0.74
Ube4aE9Q735 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Ube4aE9Q735 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC19.65■□□□□ 0.74
Ube4aE9Q735 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Ube4aE9Q735 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Ube4aE9Q735 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Ube4aE9Q735 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC19.64■□□□□ 0.73
Ube4aE9Q735 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Ube4aE9Q735 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC19.64■□□□□ 0.73
Ube4aE9Q735 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC19.64■□□□□ 0.73
Ube4aE9Q735 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC19.64■□□□□ 0.73
Ube4aE9Q735 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Ube4aE9Q735 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
Ube4aE9Q735 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Ube4aE9Q735 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Ube4aE9Q735 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Ube4aE9Q735 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Ube4aE9Q735 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC19.64■□□□□ 0.73
Ube4aE9Q735 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Ube4aE9Q735 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Ube4aE9Q735 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Ube4aE9Q735 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ube4aE9Q735 Gm45606-201ENSMUST00000209836 2795 ntBASIC19.63■□□□□ 0.73
Ube4aE9Q735 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ube4aE9Q735 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ube4aE9Q735 Gm43338-201ENSMUST00000198617 2223 ntBASIC19.63■□□□□ 0.73
Ube4aE9Q735 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
Ube4aE9Q735 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Ube4aE9Q735 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ube4aE9Q735 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ube4aE9Q735 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC19.63■□□□□ 0.73
Ube4aE9Q735 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ube4aE9Q735 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ube4aE9Q735 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ube4aE9Q735 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC19.63■□□□□ 0.73
Ube4aE9Q735 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC19.63■□□□□ 0.73
Ube4aE9Q735 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 32.3 ms