Protein–RNA interactions for Protein: E9Q5G2

Pcdhb9, Protocadherin beta 9, mousemouse

Predictions only

Length 828 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb9E9Q5G2 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Pcdhb9E9Q5G2 Gm17971-201ENSMUST00000190239 806 ntBASIC19.29■□□□□ 0.68
Pcdhb9E9Q5G2 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC19.29■□□□□ 0.68
Pcdhb9E9Q5G2 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Pcdhb9E9Q5G2 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
Pcdhb9E9Q5G2 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
Pcdhb9E9Q5G2 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC19.29■□□□□ 0.68
Pcdhb9E9Q5G2 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
Pcdhb9E9Q5G2 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Pcdhb9E9Q5G2 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
Pcdhb9E9Q5G2 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Pcdhb9E9Q5G2 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Pcdhb9E9Q5G2 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC19.28■□□□□ 0.68
Pcdhb9E9Q5G2 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Pcdhb9E9Q5G2 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Pcdhb9E9Q5G2 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Pcdhb9E9Q5G2 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Pcdhb9E9Q5G2 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC19.28■□□□□ 0.68
Pcdhb9E9Q5G2 Gm14464-201ENSMUST00000119658 1254 ntBASIC19.28■□□□□ 0.68
Pcdhb9E9Q5G2 Gm15372-201ENSMUST00000120729 834 ntBASIC19.28■□□□□ 0.68
Pcdhb9E9Q5G2 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
Pcdhb9E9Q5G2 AC114585.2-202ENSMUST00000228094 426 ntBASIC19.28■□□□□ 0.68
Pcdhb9E9Q5G2 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Pcdhb9E9Q5G2 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Pcdhb9E9Q5G2 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Pcdhb9E9Q5G2 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
Pcdhb9E9Q5G2 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
Pcdhb9E9Q5G2 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Pcdhb9E9Q5G2 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
Pcdhb9E9Q5G2 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
Pcdhb9E9Q5G2 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC19.28■□□□□ 0.68
Pcdhb9E9Q5G2 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Pcdhb9E9Q5G2 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Pcdhb9E9Q5G2 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
Pcdhb9E9Q5G2 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Pcdhb9E9Q5G2 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Pcdhb9E9Q5G2 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
Pcdhb9E9Q5G2 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC19.27■□□□□ 0.68
Pcdhb9E9Q5G2 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Pcdhb9E9Q5G2 Rprl3-201ENSMUST00000157400 290 ntBASIC19.27■□□□□ 0.68
Pcdhb9E9Q5G2 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC19.27■□□□□ 0.68
Pcdhb9E9Q5G2 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC19.27■□□□□ 0.68
Pcdhb9E9Q5G2 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC19.27■□□□□ 0.68
Pcdhb9E9Q5G2 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
Pcdhb9E9Q5G2 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Pcdhb9E9Q5G2 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Pcdhb9E9Q5G2 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Pcdhb9E9Q5G2 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.67
Pcdhb9E9Q5G2 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Pcdhb9E9Q5G2 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.67
Pcdhb9E9Q5G2 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Pcdhb9E9Q5G2 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Pcdhb9E9Q5G2 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Pcdhb9E9Q5G2 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC19.26■□□□□ 0.67
Pcdhb9E9Q5G2 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
Pcdhb9E9Q5G2 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Pcdhb9E9Q5G2 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC19.26■□□□□ 0.67
Pcdhb9E9Q5G2 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Pcdhb9E9Q5G2 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Pcdhb9E9Q5G2 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Pcdhb9E9Q5G2 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Pcdhb9E9Q5G2 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC19.26■□□□□ 0.67
Pcdhb9E9Q5G2 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Pcdhb9E9Q5G2 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Pcdhb9E9Q5G2 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Pcdhb9E9Q5G2 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC19.25■□□□□ 0.67
Pcdhb9E9Q5G2 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Pcdhb9E9Q5G2 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
Pcdhb9E9Q5G2 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Pcdhb9E9Q5G2 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Pcdhb9E9Q5G2 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
Pcdhb9E9Q5G2 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Pcdhb9E9Q5G2 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC19.25■□□□□ 0.67
Pcdhb9E9Q5G2 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Pcdhb9E9Q5G2 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC19.25■□□□□ 0.67
Pcdhb9E9Q5G2 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Pcdhb9E9Q5G2 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Pcdhb9E9Q5G2 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
Pcdhb9E9Q5G2 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Pcdhb9E9Q5G2 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC19.25■□□□□ 0.67
Pcdhb9E9Q5G2 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Pcdhb9E9Q5G2 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Pcdhb9E9Q5G2 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Pcdhb9E9Q5G2 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Pcdhb9E9Q5G2 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC19.24■□□□□ 0.67
Pcdhb9E9Q5G2 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
Pcdhb9E9Q5G2 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Pcdhb9E9Q5G2 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Pcdhb9E9Q5G2 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Pcdhb9E9Q5G2 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
Pcdhb9E9Q5G2 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Pcdhb9E9Q5G2 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC19.24■□□□□ 0.67
Pcdhb9E9Q5G2 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC19.24■□□□□ 0.67
Pcdhb9E9Q5G2 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC19.24■□□□□ 0.67
Pcdhb9E9Q5G2 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Pcdhb9E9Q5G2 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
Pcdhb9E9Q5G2 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Pcdhb9E9Q5G2 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
Pcdhb9E9Q5G2 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Pcdhb9E9Q5G2 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 25.2 ms