Protein–RNA interactions for Protein: E9Q2N0

Cpsf4l, Cleavage and polyadenylation-specific factor 4-like, mousemouse

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf4lE9Q2N0 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
Cpsf4lE9Q2N0 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Cpsf4lE9Q2N0 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cpsf4lE9Q2N0 Gm43548-201ENSMUST00000197139 2353 ntBASIC13.91□□□□□ -0.18
Cpsf4lE9Q2N0 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Cpsf4lE9Q2N0 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
Cpsf4lE9Q2N0 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cpsf4lE9Q2N0 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cpsf4lE9Q2N0 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cpsf4lE9Q2N0 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cpsf4lE9Q2N0 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cpsf4lE9Q2N0 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Cpsf4lE9Q2N0 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cpsf4lE9Q2N0 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cpsf4lE9Q2N0 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cpsf4lE9Q2N0 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Cpsf4lE9Q2N0 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cpsf4lE9Q2N0 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Cpsf4lE9Q2N0 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cpsf4lE9Q2N0 Gm29518-201ENSMUST00000190858 372 ntBASIC13.91□□□□□ -0.18
Cpsf4lE9Q2N0 Gm17808-201ENSMUST00000200859 894 ntBASIC13.91□□□□□ -0.18
Cpsf4lE9Q2N0 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cpsf4lE9Q2N0 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cpsf4lE9Q2N0 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cpsf4lE9Q2N0 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
Cpsf4lE9Q2N0 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cpsf4lE9Q2N0 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC13.91□□□□□ -0.18
Cpsf4lE9Q2N0 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cpsf4lE9Q2N0 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Cpsf4lE9Q2N0 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cpsf4lE9Q2N0 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Cpsf4lE9Q2N0 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Cpsf4lE9Q2N0 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cpsf4lE9Q2N0 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cpsf4lE9Q2N0 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cpsf4lE9Q2N0 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cpsf4lE9Q2N0 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cpsf4lE9Q2N0 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cpsf4lE9Q2N0 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cpsf4lE9Q2N0 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Cpsf4lE9Q2N0 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
Cpsf4lE9Q2N0 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cpsf4lE9Q2N0 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cpsf4lE9Q2N0 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Cpsf4lE9Q2N0 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cpsf4lE9Q2N0 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
Cpsf4lE9Q2N0 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Cpsf4lE9Q2N0 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
Cpsf4lE9Q2N0 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cpsf4lE9Q2N0 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cpsf4lE9Q2N0 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Cpsf4lE9Q2N0 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Cpsf4lE9Q2N0 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cpsf4lE9Q2N0 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
Cpsf4lE9Q2N0 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC13.9□□□□□ -0.19
Cpsf4lE9Q2N0 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
Cpsf4lE9Q2N0 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cpsf4lE9Q2N0 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Cpsf4lE9Q2N0 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Cpsf4lE9Q2N0 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC13.89□□□□□ -0.19
Cpsf4lE9Q2N0 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC13.89□□□□□ -0.19
Cpsf4lE9Q2N0 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cpsf4lE9Q2N0 Gm11950-201ENSMUST00000121615 838 ntBASIC13.89□□□□□ -0.19
Cpsf4lE9Q2N0 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC13.89□□□□□ -0.19
Cpsf4lE9Q2N0 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC13.89□□□□□ -0.19
Cpsf4lE9Q2N0 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
Cpsf4lE9Q2N0 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Cpsf4lE9Q2N0 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Cpsf4lE9Q2N0 Gm36967-201ENSMUST00000193814 266 ntBASIC13.89□□□□□ -0.19
Cpsf4lE9Q2N0 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC13.89□□□□□ -0.19
Cpsf4lE9Q2N0 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Cpsf4lE9Q2N0 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cpsf4lE9Q2N0 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cpsf4lE9Q2N0 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cpsf4lE9Q2N0 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cpsf4lE9Q2N0 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cpsf4lE9Q2N0 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cpsf4lE9Q2N0 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
Cpsf4lE9Q2N0 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cpsf4lE9Q2N0 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
Cpsf4lE9Q2N0 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cpsf4lE9Q2N0 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cpsf4lE9Q2N0 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cpsf4lE9Q2N0 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cpsf4lE9Q2N0 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cpsf4lE9Q2N0 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cpsf4lE9Q2N0 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC13.89□□□□□ -0.19
Cpsf4lE9Q2N0 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cpsf4lE9Q2N0 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cpsf4lE9Q2N0 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cpsf4lE9Q2N0 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC13.88□□□□□ -0.19
Cpsf4lE9Q2N0 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cpsf4lE9Q2N0 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cpsf4lE9Q2N0 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cpsf4lE9Q2N0 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
Cpsf4lE9Q2N0 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Cpsf4lE9Q2N0 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cpsf4lE9Q2N0 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
Cpsf4lE9Q2N0 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cpsf4lE9Q2N0 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC13.88□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 20.2 ms