Protein–RNA interactions for Protein: B1AVM1

Gm12887, Predicted gene 12887, mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm12887B1AVM1 Gm42555-201ENSMUST00000199304 1039 ntBASIC13.35□□□□□ -0.27
Gm12887B1AVM1 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Gm12887B1AVM1 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Gm12887B1AVM1 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Gm12887B1AVM1 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC13.35□□□□□ -0.27
Gm12887B1AVM1 Gm44616-201ENSMUST00000206417 1732 ntBASIC13.35□□□□□ -0.27
Gm12887B1AVM1 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Gm12887B1AVM1 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Gm12887B1AVM1 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Gm12887B1AVM1 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Gm12887B1AVM1 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Gm12887B1AVM1 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Gm12887B1AVM1 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Gm12887B1AVM1 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Gm12887B1AVM1 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC13.35□□□□□ -0.27
Gm12887B1AVM1 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC13.35□□□□□ -0.27
Gm12887B1AVM1 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Gm12887B1AVM1 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC13.34□□□□□ -0.27
Gm12887B1AVM1 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Gm12887B1AVM1 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Gm12887B1AVM1 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC13.34□□□□□ -0.27
Gm12887B1AVM1 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Gm12887B1AVM1 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Gm12887B1AVM1 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Gm12887B1AVM1 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Gm12887B1AVM1 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Gm12887B1AVM1 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Gm12887B1AVM1 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Gm12887B1AVM1 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Gm12887B1AVM1 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Gm12887B1AVM1 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Gm12887B1AVM1 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Gm12887B1AVM1 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Gm12887B1AVM1 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Gm12887B1AVM1 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Gm12887B1AVM1 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC13.34□□□□□ -0.27
Gm12887B1AVM1 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC13.34□□□□□ -0.27
Gm12887B1AVM1 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Gm12887B1AVM1 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Gm12887B1AVM1 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Gm12887B1AVM1 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Gm12887B1AVM1 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Gm12887B1AVM1 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.27
Gm12887B1AVM1 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Gm12887B1AVM1 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Gm12887B1AVM1 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Gm12887B1AVM1 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Gm12887B1AVM1 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Gm12887B1AVM1 Irs2-201ENSMUST00000040514 6323 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Gm12887B1AVM1 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Gm12887B1AVM1 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Gm12887B1AVM1 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Gm12887B1AVM1 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Gm12887B1AVM1 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Gm12887B1AVM1 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Gm12887B1AVM1 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC13.33□□□□□ -0.28
Gm12887B1AVM1 Gm42642-201ENSMUST00000200683 355 ntBASIC13.33□□□□□ -0.28
Gm12887B1AVM1 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Gm12887B1AVM1 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Gm12887B1AVM1 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Gm12887B1AVM1 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Gm12887B1AVM1 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC13.33□□□□□ -0.28
Gm12887B1AVM1 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Gm12887B1AVM1 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Gm12887B1AVM1 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Gm12887B1AVM1 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC13.33□□□□□ -0.28
Gm12887B1AVM1 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Gm12887B1AVM1 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Gm12887B1AVM1 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Gm12887B1AVM1 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Gm12887B1AVM1 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC13.32□□□□□ -0.28
Gm12887B1AVM1 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Gm12887B1AVM1 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Gm12887B1AVM1 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Gm12887B1AVM1 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Gm12887B1AVM1 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Gm12887B1AVM1 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Gm12887B1AVM1 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Gm12887B1AVM1 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Gm12887B1AVM1 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC13.32□□□□□ -0.28
Gm12887B1AVM1 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Gm12887B1AVM1 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC13.32□□□□□ -0.28
Gm12887B1AVM1 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC13.32□□□□□ -0.28
Gm12887B1AVM1 Gm4974-201ENSMUST00000209974 875 ntBASIC13.32□□□□□ -0.28
Gm12887B1AVM1 Rab3c-203ENSMUST00000224180 967 ntBASIC13.32□□□□□ -0.28
Gm12887B1AVM1 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Gm12887B1AVM1 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Gm12887B1AVM1 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Gm12887B1AVM1 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Gm12887B1AVM1 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Gm12887B1AVM1 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Gm12887B1AVM1 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Gm12887B1AVM1 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Gm12887B1AVM1 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Gm12887B1AVM1 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Gm12887B1AVM1 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Gm12887B1AVM1 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Gm12887B1AVM1 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Gm12887B1AVM1 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Gm12887B1AVM1 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 23.4 ms