Protein–RNA interactions for Protein: A6BLY7

Krt28, Keratin, type I cytoskeletal 28, mousemouse

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt28A6BLY7 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Krt28A6BLY7 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Krt28A6BLY7 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC18.17■□□□□ 0.5
Krt28A6BLY7 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Krt28A6BLY7 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Krt28A6BLY7 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC18.17■□□□□ 0.5
Krt28A6BLY7 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Krt28A6BLY7 Gm11873-201ENSMUST00000117877 1304 ntBASIC18.17■□□□□ 0.5
Krt28A6BLY7 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Krt28A6BLY7 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Krt28A6BLY7 Shroom3-211ENSMUST00000225438 5742 ntBASIC18.17■□□□□ 0.5
Krt28A6BLY7 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Krt28A6BLY7 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Krt28A6BLY7 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Krt28A6BLY7 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Krt28A6BLY7 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Krt28A6BLY7 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Krt28A6BLY7 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Krt28A6BLY7 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Krt28A6BLY7 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC18.16■□□□□ 0.5
Krt28A6BLY7 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC18.16■□□□□ 0.5
Krt28A6BLY7 AC159114.1-201ENSMUST00000220349 266 ntBASIC18.16■□□□□ 0.5
Krt28A6BLY7 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC18.16■□□□□ 0.5
Krt28A6BLY7 AC159106.1-201ENSMUST00000224421 690 ntBASIC18.16■□□□□ 0.5
Krt28A6BLY7 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
Krt28A6BLY7 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC18.16■□□□□ 0.5
Krt28A6BLY7 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
Krt28A6BLY7 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
Krt28A6BLY7 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Krt28A6BLY7 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Krt28A6BLY7 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Krt28A6BLY7 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Krt28A6BLY7 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Krt28A6BLY7 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Krt28A6BLY7 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC18.15■□□□□ 0.5
Krt28A6BLY7 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Krt28A6BLY7 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Krt28A6BLY7 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Krt28A6BLY7 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Krt28A6BLY7 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
Krt28A6BLY7 Gm11764-201ENSMUST00000120221 623 ntBASIC18.15■□□□□ 0.5
Krt28A6BLY7 Gm25406-201ENSMUST00000157599 105 ntBASIC18.15■□□□□ 0.5
Krt28A6BLY7 Ndufa1-201ENSMUST00000016571 419 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Krt28A6BLY7 Gm5253-201ENSMUST00000187104 1025 ntBASIC18.15■□□□□ 0.5
Krt28A6BLY7 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC18.15■□□□□ 0.5
Krt28A6BLY7 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Krt28A6BLY7 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC18.15■□□□□ 0.5
Krt28A6BLY7 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Krt28A6BLY7 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC18.14■□□□□ 0.5
Krt28A6BLY7 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Krt28A6BLY7 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC18.14■□□□□ 0.49
Krt28A6BLY7 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Krt28A6BLY7 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Krt28A6BLY7 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Krt28A6BLY7 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Krt28A6BLY7 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
Krt28A6BLY7 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Krt28A6BLY7 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Krt28A6BLY7 Immp2l-201ENSMUST00000080160 239 ntTSL 3 BASIC18.14■□□□□ 0.49
Krt28A6BLY7 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Krt28A6BLY7 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Krt28A6BLY7 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Krt28A6BLY7 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Krt28A6BLY7 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Krt28A6BLY7 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Krt28A6BLY7 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Krt28A6BLY7 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Krt28A6BLY7 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Krt28A6BLY7 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Krt28A6BLY7 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Krt28A6BLY7 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC18.13■□□□□ 0.49
Krt28A6BLY7 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC18.13■□□□□ 0.49
Krt28A6BLY7 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC18.13■□□□□ 0.49
Krt28A6BLY7 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Krt28A6BLY7 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC18.13■□□□□ 0.49
Krt28A6BLY7 Timm13-201ENSMUST00000020440 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Krt28A6BLY7 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC18.13■□□□□ 0.49
Krt28A6BLY7 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Krt28A6BLY7 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Krt28A6BLY7 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
Krt28A6BLY7 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Krt28A6BLY7 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Krt28A6BLY7 Tspan31-201ENSMUST00000060991 1556 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Krt28A6BLY7 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC18.12■□□□□ 0.49
Krt28A6BLY7 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Krt28A6BLY7 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Krt28A6BLY7 Adprm-201ENSMUST00000116363 1283 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Krt28A6BLY7 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC18.12■□□□□ 0.49
Krt28A6BLY7 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC18.12■□□□□ 0.49
Krt28A6BLY7 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC18.12■□□□□ 0.49
Krt28A6BLY7 Gm7229-201ENSMUST00000214719 1007 ntBASIC18.12■□□□□ 0.49
Krt28A6BLY7 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC18.12■□□□□ 0.49
Krt28A6BLY7 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
Krt28A6BLY7 Pts-201ENSMUST00000034570 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Krt28A6BLY7 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Krt28A6BLY7 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Krt28A6BLY7 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Krt28A6BLY7 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Krt28A6BLY7 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Krt28A6BLY7 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 32.5 ms