Protein–RNA interactions for Protein: A1A546

Isx, Intestine-specific homeobox, mousemouse

Predictions only

Length 240 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IsxA1A546 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
IsxA1A546 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
IsxA1A546 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
IsxA1A546 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC15.31■□□□□ 0.04
IsxA1A546 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC15.31■□□□□ 0.04
IsxA1A546 Nespas-201ENSMUST00000143738 1083 ntBASIC15.31■□□□□ 0.04
IsxA1A546 Gm5408-201ENSMUST00000197998 747 ntBASIC15.31■□□□□ 0.04
IsxA1A546 Zfp783-201ENSMUST00000095946 670 ntBASIC15.31■□□□□ 0.04
IsxA1A546 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
IsxA1A546 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
IsxA1A546 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC15.31■□□□□ 0.04
IsxA1A546 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC15.31■□□□□ 0.04
IsxA1A546 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
IsxA1A546 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC15.3■□□□□ 0.04
IsxA1A546 App-207ENSMUST00000227737 2827 ntBASIC15.3■□□□□ 0.04
IsxA1A546 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
IsxA1A546 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
IsxA1A546 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
IsxA1A546 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
IsxA1A546 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
IsxA1A546 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC15.3■□□□□ 0.04
IsxA1A546 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
IsxA1A546 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
IsxA1A546 Gm37736-201ENSMUST00000193564 2802 ntBASIC15.3■□□□□ 0.04
IsxA1A546 Gm42901-201ENSMUST00000197735 3171 ntBASIC15.3■□□□□ 0.04
IsxA1A546 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
IsxA1A546 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC15.3■□□□□ 0.04
IsxA1A546 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
IsxA1A546 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
IsxA1A546 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
IsxA1A546 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
IsxA1A546 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC15.3■□□□□ 0.04
IsxA1A546 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
IsxA1A546 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
IsxA1A546 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
IsxA1A546 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
IsxA1A546 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
IsxA1A546 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
IsxA1A546 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
IsxA1A546 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC15.29■□□□□ 0.04
IsxA1A546 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
IsxA1A546 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC15.29■□□□□ 0.04
IsxA1A546 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC15.29■□□□□ 0.04
IsxA1A546 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
IsxA1A546 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
IsxA1A546 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
IsxA1A546 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
IsxA1A546 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC15.29■□□□□ 0.04
IsxA1A546 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
IsxA1A546 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
IsxA1A546 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC15.29■□□□□ 0.04
IsxA1A546 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
IsxA1A546 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
IsxA1A546 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
IsxA1A546 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
IsxA1A546 Gm43352-201ENSMUST00000196419 3065 ntBASIC15.28■□□□□ 0.04
IsxA1A546 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
IsxA1A546 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
IsxA1A546 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
IsxA1A546 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
IsxA1A546 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
IsxA1A546 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
IsxA1A546 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
IsxA1A546 Gm6211-202ENSMUST00000167849 925 ntBASIC15.28■□□□□ 0.04
IsxA1A546 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
IsxA1A546 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
IsxA1A546 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
IsxA1A546 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
IsxA1A546 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
IsxA1A546 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
IsxA1A546 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC15.28■□□□□ 0.04
IsxA1A546 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC15.28■□□□□ 0.04
IsxA1A546 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
IsxA1A546 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
IsxA1A546 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
IsxA1A546 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
IsxA1A546 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
IsxA1A546 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
IsxA1A546 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
IsxA1A546 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
IsxA1A546 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
IsxA1A546 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
IsxA1A546 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
IsxA1A546 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
IsxA1A546 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC15.27■□□□□ 0.04
IsxA1A546 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
IsxA1A546 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
IsxA1A546 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
IsxA1A546 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
IsxA1A546 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
IsxA1A546 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
IsxA1A546 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
IsxA1A546 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
IsxA1A546 Gm4968-201ENSMUST00000071458 858 ntBASIC15.27■□□□□ 0.04
IsxA1A546 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
IsxA1A546 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
IsxA1A546 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
IsxA1A546 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
IsxA1A546 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
IsxA1A546 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 25.7 ms