Protein–RNA interactions for Protein: A0N8R1

Trav12-1, T cell receptor alpha variable 12-1 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12-1A0N8R1 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav12-1A0N8R1 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
Trav12-1A0N8R1 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav12-1A0N8R1 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav12-1A0N8R1 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav12-1A0N8R1 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC13.72□□□□□ -0.21
Trav12-1A0N8R1 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Trav12-1A0N8R1 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trav12-1A0N8R1 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC13.71□□□□□ -0.21
Trav12-1A0N8R1 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Trav12-1A0N8R1 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
Trav12-1A0N8R1 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trav12-1A0N8R1 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC13.71□□□□□ -0.21
Trav12-1A0N8R1 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Trav12-1A0N8R1 AC153881.1-201ENSMUST00000214448 284 ntBASIC13.71□□□□□ -0.21
Trav12-1A0N8R1 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trav12-1A0N8R1 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trav12-1A0N8R1 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
Trav12-1A0N8R1 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Trav12-1A0N8R1 AC133083.1-201ENSMUST00000221736 2209 ntBASIC13.71□□□□□ -0.22
Trav12-1A0N8R1 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Trav12-1A0N8R1 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Trav12-1A0N8R1 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Trav12-1A0N8R1 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav12-1A0N8R1 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav12-1A0N8R1 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav12-1A0N8R1 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav12-1A0N8R1 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav12-1A0N8R1 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav12-1A0N8R1 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav12-1A0N8R1 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav12-1A0N8R1 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav12-1A0N8R1 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav12-1A0N8R1 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav12-1A0N8R1 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC13.7□□□□□ -0.22
Trav12-1A0N8R1 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
Trav12-1A0N8R1 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC13.7□□□□□ -0.22
Trav12-1A0N8R1 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC13.7□□□□□ -0.22
Trav12-1A0N8R1 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
Trav12-1A0N8R1 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav12-1A0N8R1 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav12-1A0N8R1 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav12-1A0N8R1 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav12-1A0N8R1 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav12-1A0N8R1 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav12-1A0N8R1 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Trav12-1A0N8R1 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Trav12-1A0N8R1 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC13.7□□□□□ -0.22
Trav12-1A0N8R1 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav12-1A0N8R1 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Trav12-1A0N8R1 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Trav12-1A0N8R1 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav12-1A0N8R1 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav12-1A0N8R1 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Trav12-1A0N8R1 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav12-1A0N8R1 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC13.69□□□□□ -0.22
Trav12-1A0N8R1 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav12-1A0N8R1 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav12-1A0N8R1 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav12-1A0N8R1 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC13.69□□□□□ -0.22
Trav12-1A0N8R1 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav12-1A0N8R1 Gm3375-201ENSMUST00000203929 796 ntBASIC13.69□□□□□ -0.22
Trav12-1A0N8R1 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav12-1A0N8R1 Otx2os1-204ENSMUST00000227221 751 ntBASIC13.69□□□□□ -0.22
Trav12-1A0N8R1 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav12-1A0N8R1 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Trav12-1A0N8R1 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Trav12-1A0N8R1 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC13.69□□□□□ -0.22
Trav12-1A0N8R1 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav12-1A0N8R1 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Trav12-1A0N8R1 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav12-1A0N8R1 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav12-1A0N8R1 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav12-1A0N8R1 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav12-1A0N8R1 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav12-1A0N8R1 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav12-1A0N8R1 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC13.69□□□□□ -0.22
Trav12-1A0N8R1 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav12-1A0N8R1 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav12-1A0N8R1 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav12-1A0N8R1 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav12-1A0N8R1 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav12-1A0N8R1 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav12-1A0N8R1 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Trav12-1A0N8R1 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav12-1A0N8R1 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC13.68□□□□□ -0.22
Trav12-1A0N8R1 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav12-1A0N8R1 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav12-1A0N8R1 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav12-1A0N8R1 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav12-1A0N8R1 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav12-1A0N8R1 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav12-1A0N8R1 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav12-1A0N8R1 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav12-1A0N8R1 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav12-1A0N8R1 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav12-1A0N8R1 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Trav12-1A0N8R1 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Trav12-1A0N8R1 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Trav12-1A0N8R1 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC13.68□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 35 ms