Protein–RNA interactions for Protein: A0N8R0

Trav12d-1, T cell receptor alpha variable 12D-1 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12d-1A0N8R0 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav12d-1A0N8R0 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav12d-1A0N8R0 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav12d-1A0N8R0 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav12d-1A0N8R0 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC13.23□□□□□ -0.29
Trav12d-1A0N8R0 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav12d-1A0N8R0 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Trav12d-1A0N8R0 Gm7712-202ENSMUST00000222331 1510 ntBASIC13.23□□□□□ -0.29
Trav12d-1A0N8R0 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC13.23□□□□□ -0.29
Trav12d-1A0N8R0 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Trav12d-1A0N8R0 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav12d-1A0N8R0 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Trav12d-1A0N8R0 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav12d-1A0N8R0 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav12d-1A0N8R0 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav12d-1A0N8R0 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav12d-1A0N8R0 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav12d-1A0N8R0 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav12d-1A0N8R0 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC13.22□□□□□ -0.29
Trav12d-1A0N8R0 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Trav12d-1A0N8R0 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav12d-1A0N8R0 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Trav12d-1A0N8R0 Gm6190-201ENSMUST00000220683 1374 ntBASIC13.22□□□□□ -0.29
Trav12d-1A0N8R0 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC13.22□□□□□ -0.29
Trav12d-1A0N8R0 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Trav12d-1A0N8R0 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav12d-1A0N8R0 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav12d-1A0N8R0 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav12d-1A0N8R0 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav12d-1A0N8R0 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav12d-1A0N8R0 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC13.22□□□□□ -0.29
Trav12d-1A0N8R0 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav12d-1A0N8R0 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Trav12d-1A0N8R0 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav12d-1A0N8R0 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC13.22□□□□□ -0.29
Trav12d-1A0N8R0 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav12d-1A0N8R0 Gm5643-201ENSMUST00000117081 966 ntBASIC13.22□□□□□ -0.29
Trav12d-1A0N8R0 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC13.22□□□□□ -0.29
Trav12d-1A0N8R0 Gm37856-201ENSMUST00000191634 999 ntBASIC13.22□□□□□ -0.29
Trav12d-1A0N8R0 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Trav12d-1A0N8R0 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav12d-1A0N8R0 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC13.22□□□□□ -0.29
Trav12d-1A0N8R0 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC13.22□□□□□ -0.29
Trav12d-1A0N8R0 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav12d-1A0N8R0 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC13.22□□□□□ -0.29
Trav12d-1A0N8R0 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav12d-1A0N8R0 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
Trav12d-1A0N8R0 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav12d-1A0N8R0 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC13.21□□□□□ -0.29
Trav12d-1A0N8R0 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav12d-1A0N8R0 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav12d-1A0N8R0 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav12d-1A0N8R0 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Trav12d-1A0N8R0 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav12d-1A0N8R0 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
Trav12d-1A0N8R0 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav12d-1A0N8R0 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav12d-1A0N8R0 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC13.21□□□□□ -0.29
Trav12d-1A0N8R0 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
Trav12d-1A0N8R0 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav12d-1A0N8R0 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
Trav12d-1A0N8R0 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav12d-1A0N8R0 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
Trav12d-1A0N8R0 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav12d-1A0N8R0 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Trav12d-1A0N8R0 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
Trav12d-1A0N8R0 AC159205.3-201ENSMUST00000224614 874 ntBASIC13.21□□□□□ -0.29
Trav12d-1A0N8R0 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav12d-1A0N8R0 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
Trav12d-1A0N8R0 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav12d-1A0N8R0 Gfra2-202ENSMUST00000227633 1480 ntBASIC13.21□□□□□ -0.3
Trav12d-1A0N8R0 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Trav12d-1A0N8R0 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Trav12d-1A0N8R0 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.3
Trav12d-1A0N8R0 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Trav12d-1A0N8R0 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.3
Trav12d-1A0N8R0 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC13.2□□□□□ -0.3
Trav12d-1A0N8R0 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav12d-1A0N8R0 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav12d-1A0N8R0 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav12d-1A0N8R0 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav12d-1A0N8R0 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav12d-1A0N8R0 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Trav12d-1A0N8R0 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav12d-1A0N8R0 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Trav12d-1A0N8R0 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav12d-1A0N8R0 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
Trav12d-1A0N8R0 Actl10-202ENSMUST00000226583 1501 ntBASIC13.2□□□□□ -0.3
Trav12d-1A0N8R0 Gm44616-201ENSMUST00000206417 1732 ntBASIC13.2□□□□□ -0.3
Trav12d-1A0N8R0 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav12d-1A0N8R0 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav12d-1A0N8R0 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Trav12d-1A0N8R0 AC154855.1-201ENSMUST00000227353 1458 ntBASIC13.2□□□□□ -0.3
Trav12d-1A0N8R0 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Trav12d-1A0N8R0 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
Trav12d-1A0N8R0 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Trav12d-1A0N8R0 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav12d-1A0N8R0 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Trav12d-1A0N8R0 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav12d-1A0N8R0 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 20.3 ms