Protein–RNA interactions for Protein: A0N8N6

Trav12-2, T cell receptor alpha variable 12-2 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12-2A0N8N6 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Trav12-2A0N8N6 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trav12-2A0N8N6 Gm11336-201ENSMUST00000118168 334 ntBASIC14.46□□□□□ -0.09
Trav12-2A0N8N6 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC14.46□□□□□ -0.09
Trav12-2A0N8N6 Mir1668-201ENSMUST00000184114 107 ntBASIC14.46□□□□□ -0.09
Trav12-2A0N8N6 AC159205.6-201ENSMUST00000224935 887 ntBASIC14.46□□□□□ -0.09
Trav12-2A0N8N6 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trav12-2A0N8N6 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trav12-2A0N8N6 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
Trav12-2A0N8N6 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trav12-2A0N8N6 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trav12-2A0N8N6 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trav12-2A0N8N6 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trav12-2A0N8N6 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.1
Trav12-2A0N8N6 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Trav12-2A0N8N6 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Trav12-2A0N8N6 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.1
Trav12-2A0N8N6 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
Trav12-2A0N8N6 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.1
Trav12-2A0N8N6 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC14.45□□□□□ -0.1
Trav12-2A0N8N6 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC14.45□□□□□ -0.1
Trav12-2A0N8N6 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav12-2A0N8N6 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav12-2A0N8N6 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Trav12-2A0N8N6 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav12-2A0N8N6 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Trav12-2A0N8N6 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav12-2A0N8N6 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC14.45□□□□□ -0.1
Trav12-2A0N8N6 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC14.45□□□□□ -0.1
Trav12-2A0N8N6 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav12-2A0N8N6 Gm29707-201ENSMUST00000196325 491 ntBASIC14.45□□□□□ -0.1
Trav12-2A0N8N6 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Trav12-2A0N8N6 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav12-2A0N8N6 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Trav12-2A0N8N6 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav12-2A0N8N6 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav12-2A0N8N6 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav12-2A0N8N6 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Trav12-2A0N8N6 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav12-2A0N8N6 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC14.45□□□□□ -0.1
Trav12-2A0N8N6 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav12-2A0N8N6 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav12-2A0N8N6 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Trav12-2A0N8N6 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav12-2A0N8N6 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav12-2A0N8N6 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav12-2A0N8N6 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav12-2A0N8N6 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav12-2A0N8N6 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav12-2A0N8N6 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav12-2A0N8N6 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav12-2A0N8N6 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav12-2A0N8N6 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC14.44□□□□□ -0.1
Trav12-2A0N8N6 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Trav12-2A0N8N6 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC14.44□□□□□ -0.1
Trav12-2A0N8N6 Gm36967-201ENSMUST00000193814 266 ntBASIC14.44□□□□□ -0.1
Trav12-2A0N8N6 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC14.44□□□□□ -0.1
Trav12-2A0N8N6 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav12-2A0N8N6 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav12-2A0N8N6 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav12-2A0N8N6 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Trav12-2A0N8N6 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav12-2A0N8N6 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Trav12-2A0N8N6 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav12-2A0N8N6 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Trav12-2A0N8N6 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav12-2A0N8N6 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Trav12-2A0N8N6 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav12-2A0N8N6 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav12-2A0N8N6 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav12-2A0N8N6 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav12-2A0N8N6 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav12-2A0N8N6 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Trav12-2A0N8N6 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Trav12-2A0N8N6 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC14.43□□□□□ -0.1
Trav12-2A0N8N6 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC14.43□□□□□ -0.1
Trav12-2A0N8N6 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav12-2A0N8N6 Gm14464-201ENSMUST00000119658 1254 ntBASIC14.43□□□□□ -0.1
Trav12-2A0N8N6 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC14.43□□□□□ -0.1
Trav12-2A0N8N6 Gm7889-201ENSMUST00000185591 958 ntBASIC14.43□□□□□ -0.1
Trav12-2A0N8N6 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC14.43□□□□□ -0.1
Trav12-2A0N8N6 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav12-2A0N8N6 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
Trav12-2A0N8N6 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav12-2A0N8N6 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav12-2A0N8N6 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav12-2A0N8N6 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav12-2A0N8N6 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav12-2A0N8N6 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav12-2A0N8N6 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Trav12-2A0N8N6 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav12-2A0N8N6 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav12-2A0N8N6 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav12-2A0N8N6 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Trav12-2A0N8N6 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Trav12-2A0N8N6 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trav12-2A0N8N6 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trav12-2A0N8N6 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Trav12-2A0N8N6 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trav12-2A0N8N6 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 18.8 ms