Protein–RNA interactions for Protein: A0A1B0GSK3

Lnp1, Leukemia NUP98 fusion partner 1, mousemouse

Predictions only

Length 178 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lnp1A0A1B0GSK3 Gm28265-201ENSMUST00000188201 2319 ntBASIC13.68□□□□□ -0.22
Lnp1A0A1B0GSK3 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Lnp1A0A1B0GSK3 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Lnp1A0A1B0GSK3 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Lnp1A0A1B0GSK3 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Lnp1A0A1B0GSK3 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC13.68□□□□□ -0.22
Lnp1A0A1B0GSK3 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Lnp1A0A1B0GSK3 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC13.68□□□□□ -0.22
Lnp1A0A1B0GSK3 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC13.68□□□□□ -0.22
Lnp1A0A1B0GSK3 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Lnp1A0A1B0GSK3 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Lnp1A0A1B0GSK3 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Lnp1A0A1B0GSK3 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Lnp1A0A1B0GSK3 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC13.68□□□□□ -0.22
Lnp1A0A1B0GSK3 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Lnp1A0A1B0GSK3 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Lnp1A0A1B0GSK3 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Lnp1A0A1B0GSK3 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Lnp1A0A1B0GSK3 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC13.67□□□□□ -0.22
Lnp1A0A1B0GSK3 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Lnp1A0A1B0GSK3 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC13.67□□□□□ -0.22
Lnp1A0A1B0GSK3 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Lnp1A0A1B0GSK3 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Lnp1A0A1B0GSK3 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
Lnp1A0A1B0GSK3 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Lnp1A0A1B0GSK3 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Lnp1A0A1B0GSK3 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Lnp1A0A1B0GSK3 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Lnp1A0A1B0GSK3 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Lnp1A0A1B0GSK3 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Lnp1A0A1B0GSK3 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC13.67□□□□□ -0.22
Lnp1A0A1B0GSK3 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Lnp1A0A1B0GSK3 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Lnp1A0A1B0GSK3 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Lnp1A0A1B0GSK3 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Lnp1A0A1B0GSK3 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Lnp1A0A1B0GSK3 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Lnp1A0A1B0GSK3 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Lnp1A0A1B0GSK3 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Lnp1A0A1B0GSK3 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Lnp1A0A1B0GSK3 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Lnp1A0A1B0GSK3 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Lnp1A0A1B0GSK3 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Lnp1A0A1B0GSK3 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Lnp1A0A1B0GSK3 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Lnp1A0A1B0GSK3 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Lnp1A0A1B0GSK3 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC13.66□□□□□ -0.22
Lnp1A0A1B0GSK3 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Lnp1A0A1B0GSK3 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Lnp1A0A1B0GSK3 Gm45412-201ENSMUST00000210217 2275 ntBASIC13.66□□□□□ -0.22
Lnp1A0A1B0GSK3 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Lnp1A0A1B0GSK3 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Lnp1A0A1B0GSK3 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Lnp1A0A1B0GSK3 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Lnp1A0A1B0GSK3 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Lnp1A0A1B0GSK3 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Lnp1A0A1B0GSK3 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Lnp1A0A1B0GSK3 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Lnp1A0A1B0GSK3 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Lnp1A0A1B0GSK3 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Lnp1A0A1B0GSK3 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Lnp1A0A1B0GSK3 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Lnp1A0A1B0GSK3 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Lnp1A0A1B0GSK3 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC13.66□□□□□ -0.22
Lnp1A0A1B0GSK3 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Lnp1A0A1B0GSK3 Mir1668-201ENSMUST00000184114 107 ntBASIC13.66□□□□□ -0.22
Lnp1A0A1B0GSK3 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Lnp1A0A1B0GSK3 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC13.66□□□□□ -0.22
Lnp1A0A1B0GSK3 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC13.66□□□□□ -0.22
Lnp1A0A1B0GSK3 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Lnp1A0A1B0GSK3 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Lnp1A0A1B0GSK3 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Lnp1A0A1B0GSK3 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Lnp1A0A1B0GSK3 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Lnp1A0A1B0GSK3 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Lnp1A0A1B0GSK3 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Lnp1A0A1B0GSK3 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Lnp1A0A1B0GSK3 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Lnp1A0A1B0GSK3 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Lnp1A0A1B0GSK3 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Lnp1A0A1B0GSK3 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Lnp1A0A1B0GSK3 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Lnp1A0A1B0GSK3 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Lnp1A0A1B0GSK3 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Lnp1A0A1B0GSK3 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Lnp1A0A1B0GSK3 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Lnp1A0A1B0GSK3 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Lnp1A0A1B0GSK3 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Lnp1A0A1B0GSK3 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Lnp1A0A1B0GSK3 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Lnp1A0A1B0GSK3 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC13.65□□□□□ -0.22
Lnp1A0A1B0GSK3 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC13.65□□□□□ -0.22
Lnp1A0A1B0GSK3 Gm26039-201ENSMUST00000158152 144 ntBASIC13.65□□□□□ -0.22
Lnp1A0A1B0GSK3 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Lnp1A0A1B0GSK3 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Lnp1A0A1B0GSK3 Gm44450-201ENSMUST00000199528 114 ntBASIC13.65□□□□□ -0.22
Lnp1A0A1B0GSK3 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Lnp1A0A1B0GSK3 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Lnp1A0A1B0GSK3 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Lnp1A0A1B0GSK3 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 36.9 ms