Protein–RNA interactions for Protein: A0A140T8V5

Pcna-ps2, Proliferating cell nuclear antigen, mousemouse

Predictions only

Length 261 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcna-ps2A0A140T8V5 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pcna-ps2A0A140T8V5 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Pcna-ps2A0A140T8V5 Gm27000-201ENSMUST00000182943 842 ntBASIC16.53■□□□□ 0.24
Pcna-ps2A0A140T8V5 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC16.53■□□□□ 0.24
Pcna-ps2A0A140T8V5 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pcna-ps2A0A140T8V5 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
Pcna-ps2A0A140T8V5 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pcna-ps2A0A140T8V5 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pcna-ps2A0A140T8V5 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Pcna-ps2A0A140T8V5 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pcna-ps2A0A140T8V5 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pcna-ps2A0A140T8V5 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Pcna-ps2A0A140T8V5 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Pcna-ps2A0A140T8V5 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pcna-ps2A0A140T8V5 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pcna-ps2A0A140T8V5 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Pcna-ps2A0A140T8V5 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Pcna-ps2A0A140T8V5 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
Pcna-ps2A0A140T8V5 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Pcna-ps2A0A140T8V5 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
Pcna-ps2A0A140T8V5 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Pcna-ps2A0A140T8V5 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Pcna-ps2A0A140T8V5 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
Pcna-ps2A0A140T8V5 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
Pcna-ps2A0A140T8V5 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Pcna-ps2A0A140T8V5 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Pcna-ps2A0A140T8V5 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC16.52■□□□□ 0.24
Pcna-ps2A0A140T8V5 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Pcna-ps2A0A140T8V5 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Pcna-ps2A0A140T8V5 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC16.52■□□□□ 0.23
Pcna-ps2A0A140T8V5 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Pcna-ps2A0A140T8V5 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Pcna-ps2A0A140T8V5 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Pcna-ps2A0A140T8V5 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Pcna-ps2A0A140T8V5 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
Pcna-ps2A0A140T8V5 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Pcna-ps2A0A140T8V5 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Pcna-ps2A0A140T8V5 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Pcna-ps2A0A140T8V5 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC16.51■□□□□ 0.23
Pcna-ps2A0A140T8V5 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
Pcna-ps2A0A140T8V5 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
Pcna-ps2A0A140T8V5 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Pcna-ps2A0A140T8V5 Mir7071-201ENSMUST00000184847 69 ntBASIC16.51■□□□□ 0.23
Pcna-ps2A0A140T8V5 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
Pcna-ps2A0A140T8V5 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Pcna-ps2A0A140T8V5 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
Pcna-ps2A0A140T8V5 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Pcna-ps2A0A140T8V5 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Pcna-ps2A0A140T8V5 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC16.51■□□□□ 0.23
Pcna-ps2A0A140T8V5 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Pcna-ps2A0A140T8V5 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC16.51■□□□□ 0.23
Pcna-ps2A0A140T8V5 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Pcna-ps2A0A140T8V5 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Pcna-ps2A0A140T8V5 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Pcna-ps2A0A140T8V5 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Pcna-ps2A0A140T8V5 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Pcna-ps2A0A140T8V5 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Pcna-ps2A0A140T8V5 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
Pcna-ps2A0A140T8V5 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC16.5■□□□□ 0.23
Pcna-ps2A0A140T8V5 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
Pcna-ps2A0A140T8V5 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Pcna-ps2A0A140T8V5 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Pcna-ps2A0A140T8V5 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Pcna-ps2A0A140T8V5 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Pcna-ps2A0A140T8V5 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
Pcna-ps2A0A140T8V5 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC16.5■□□□□ 0.23
Pcna-ps2A0A140T8V5 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC16.5■□□□□ 0.23
Pcna-ps2A0A140T8V5 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Pcna-ps2A0A140T8V5 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
Pcna-ps2A0A140T8V5 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Pcna-ps2A0A140T8V5 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Pcna-ps2A0A140T8V5 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Pcna-ps2A0A140T8V5 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Pcna-ps2A0A140T8V5 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Pcna-ps2A0A140T8V5 Gm42918-201ENSMUST00000199249 1580 ntBASIC16.5■□□□□ 0.23
Pcna-ps2A0A140T8V5 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Pcna-ps2A0A140T8V5 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Pcna-ps2A0A140T8V5 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
Pcna-ps2A0A140T8V5 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Pcna-ps2A0A140T8V5 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Pcna-ps2A0A140T8V5 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Pcna-ps2A0A140T8V5 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
Pcna-ps2A0A140T8V5 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Pcna-ps2A0A140T8V5 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Pcna-ps2A0A140T8V5 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Pcna-ps2A0A140T8V5 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Pcna-ps2A0A140T8V5 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Pcna-ps2A0A140T8V5 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Pcna-ps2A0A140T8V5 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
Pcna-ps2A0A140T8V5 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC16.49■□□□□ 0.23
Pcna-ps2A0A140T8V5 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Pcna-ps2A0A140T8V5 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Pcna-ps2A0A140T8V5 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Pcna-ps2A0A140T8V5 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
Pcna-ps2A0A140T8V5 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC16.49■□□□□ 0.23
Pcna-ps2A0A140T8V5 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Pcna-ps2A0A140T8V5 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Pcna-ps2A0A140T8V5 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC16.48■□□□□ 0.23
Pcna-ps2A0A140T8V5 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Pcna-ps2A0A140T8V5 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 22.9 ms