Protein–RNA interactions for Protein: A0A0G2JFX3

Trav13d-4, T cell receptor alpha variable 13D-4 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13d-4A0A0G2JFX3 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav13d-4A0A0G2JFX3 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav13d-4A0A0G2JFX3 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC11.35□□□□□ -0.59
Trav13d-4A0A0G2JFX3 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav13d-4A0A0G2JFX3 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Trav13d-4A0A0G2JFX3 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav13d-4A0A0G2JFX3 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav13d-4A0A0G2JFX3 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav13d-4A0A0G2JFX3 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav13d-4A0A0G2JFX3 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav13d-4A0A0G2JFX3 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav13d-4A0A0G2JFX3 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav13d-4A0A0G2JFX3 Dlg4-201ENSMUST00000018700 3204 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav13d-4A0A0G2JFX3 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav13d-4A0A0G2JFX3 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav13d-4A0A0G2JFX3 Mib1-201ENSMUST00000052838 10231 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav13d-4A0A0G2JFX3 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC11.34□□□□□ -0.59
Trav13d-4A0A0G2JFX3 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Trav13d-4A0A0G2JFX3 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC11.34□□□□□ -0.59
Trav13d-4A0A0G2JFX3 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC11.34□□□□□ -0.59
Trav13d-4A0A0G2JFX3 H2-K2-201ENSMUST00000174250 1049 ntBASIC11.34□□□□□ -0.59
Trav13d-4A0A0G2JFX3 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
Trav13d-4A0A0G2JFX3 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC11.34□□□□□ -0.59
Trav13d-4A0A0G2JFX3 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav13d-4A0A0G2JFX3 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC11.34□□□□□ -0.59
Trav13d-4A0A0G2JFX3 Gm20049-201ENSMUST00000219950 730 ntBASIC11.34□□□□□ -0.59
Trav13d-4A0A0G2JFX3 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC11.34□□□□□ -0.59
Trav13d-4A0A0G2JFX3 AC107711.5-202ENSMUST00000226429 702 ntBASIC11.34□□□□□ -0.59
Trav13d-4A0A0G2JFX3 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav13d-4A0A0G2JFX3 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav13d-4A0A0G2JFX3 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav13d-4A0A0G2JFX3 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav13d-4A0A0G2JFX3 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav13d-4A0A0G2JFX3 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav13d-4A0A0G2JFX3 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Trav13d-4A0A0G2JFX3 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav13d-4A0A0G2JFX3 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav13d-4A0A0G2JFX3 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav13d-4A0A0G2JFX3 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC11.34□□□□□ -0.59
Trav13d-4A0A0G2JFX3 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Trav13d-4A0A0G2JFX3 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
Trav13d-4A0A0G2JFX3 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav13d-4A0A0G2JFX3 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC11.34□□□□□ -0.59
Trav13d-4A0A0G2JFX3 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC11.33□□□□□ -0.59
Trav13d-4A0A0G2JFX3 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav13d-4A0A0G2JFX3 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav13d-4A0A0G2JFX3 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC11.33□□□□□ -0.6
Trav13d-4A0A0G2JFX3 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav13d-4A0A0G2JFX3 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC11.33□□□□□ -0.6
Trav13d-4A0A0G2JFX3 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav13d-4A0A0G2JFX3 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav13d-4A0A0G2JFX3 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav13d-4A0A0G2JFX3 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC11.33□□□□□ -0.6
Trav13d-4A0A0G2JFX3 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC11.33□□□□□ -0.6
Trav13d-4A0A0G2JFX3 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC11.33□□□□□ -0.6
Trav13d-4A0A0G2JFX3 Gm37025-201ENSMUST00000195159 829 ntBASIC11.33□□□□□ -0.6
Trav13d-4A0A0G2JFX3 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC11.33□□□□□ -0.6
Trav13d-4A0A0G2JFX3 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Trav13d-4A0A0G2JFX3 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav13d-4A0A0G2JFX3 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav13d-4A0A0G2JFX3 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Trav13d-4A0A0G2JFX3 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav13d-4A0A0G2JFX3 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav13d-4A0A0G2JFX3 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Trav13d-4A0A0G2JFX3 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav13d-4A0A0G2JFX3 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav13d-4A0A0G2JFX3 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav13d-4A0A0G2JFX3 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav13d-4A0A0G2JFX3 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC11.32□□□□□ -0.6
Trav13d-4A0A0G2JFX3 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Trav13d-4A0A0G2JFX3 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav13d-4A0A0G2JFX3 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
Trav13d-4A0A0G2JFX3 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Trav13d-4A0A0G2JFX3 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
Trav13d-4A0A0G2JFX3 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav13d-4A0A0G2JFX3 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav13d-4A0A0G2JFX3 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav13d-4A0A0G2JFX3 Gm45605-201ENSMUST00000210265 4269 ntBASIC11.32□□□□□ -0.6
Trav13d-4A0A0G2JFX3 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC11.32□□□□□ -0.6
Trav13d-4A0A0G2JFX3 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Trav13d-4A0A0G2JFX3 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav13d-4A0A0G2JFX3 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
Trav13d-4A0A0G2JFX3 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav13d-4A0A0G2JFX3 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav13d-4A0A0G2JFX3 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC11.32□□□□□ -0.6
Trav13d-4A0A0G2JFX3 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC11.32□□□□□ -0.6
Trav13d-4A0A0G2JFX3 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
Trav13d-4A0A0G2JFX3 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Trav13d-4A0A0G2JFX3 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav13d-4A0A0G2JFX3 Adgrl1-210ENSMUST00000152978 5734 ntTSL 5 BASIC11.32□□□□□ -0.6
Trav13d-4A0A0G2JFX3 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav13d-4A0A0G2JFX3 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
Trav13d-4A0A0G2JFX3 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav13d-4A0A0G2JFX3 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav13d-4A0A0G2JFX3 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav13d-4A0A0G2JFX3 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
Trav13d-4A0A0G2JFX3 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav13d-4A0A0G2JFX3 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
Trav13d-4A0A0G2JFX3 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Trav13d-4A0A0G2JFX3 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 21.7 ms