Protein–RNA interactions for Protein: A0A0B4J1P8

Trbv13-1, T cell receptor beta, variable 13-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv13-1A0A0B4J1P8 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trbv13-1A0A0B4J1P8 Gm36858-201ENSMUST00000194501 2391 ntBASIC12.28□□□□□ -0.44
Trbv13-1A0A0B4J1P8 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trbv13-1A0A0B4J1P8 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trbv13-1A0A0B4J1P8 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trbv13-1A0A0B4J1P8 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Trbv13-1A0A0B4J1P8 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Trbv13-1A0A0B4J1P8 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Trbv13-1A0A0B4J1P8 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC12.27□□□□□ -0.44
Trbv13-1A0A0B4J1P8 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.44
Trbv13-1A0A0B4J1P8 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Trbv13-1A0A0B4J1P8 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Trbv13-1A0A0B4J1P8 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Trbv13-1A0A0B4J1P8 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Trbv13-1A0A0B4J1P8 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trbv13-1A0A0B4J1P8 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
Trbv13-1A0A0B4J1P8 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trbv13-1A0A0B4J1P8 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Trbv13-1A0A0B4J1P8 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Trbv13-1A0A0B4J1P8 Gm13216-201ENSMUST00000117145 591 ntBASIC12.27□□□□□ -0.45
Trbv13-1A0A0B4J1P8 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trbv13-1A0A0B4J1P8 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Trbv13-1A0A0B4J1P8 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC12.27□□□□□ -0.45
Trbv13-1A0A0B4J1P8 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Trbv13-1A0A0B4J1P8 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC12.27□□□□□ -0.45
Trbv13-1A0A0B4J1P8 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
Trbv13-1A0A0B4J1P8 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Trbv13-1A0A0B4J1P8 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trbv13-1A0A0B4J1P8 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC12.27□□□□□ -0.45
Trbv13-1A0A0B4J1P8 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trbv13-1A0A0B4J1P8 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trbv13-1A0A0B4J1P8 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trbv13-1A0A0B4J1P8 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trbv13-1A0A0B4J1P8 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trbv13-1A0A0B4J1P8 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC12.27□□□□□ -0.45
Trbv13-1A0A0B4J1P8 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC12.27□□□□□ -0.45
Trbv13-1A0A0B4J1P8 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC12.27□□□□□ -0.45
Trbv13-1A0A0B4J1P8 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trbv13-1A0A0B4J1P8 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trbv13-1A0A0B4J1P8 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Trbv13-1A0A0B4J1P8 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trbv13-1A0A0B4J1P8 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC12.27□□□□□ -0.45
Trbv13-1A0A0B4J1P8 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Trbv13-1A0A0B4J1P8 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
Trbv13-1A0A0B4J1P8 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trbv13-1A0A0B4J1P8 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trbv13-1A0A0B4J1P8 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC12.26□□□□□ -0.45
Trbv13-1A0A0B4J1P8 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trbv13-1A0A0B4J1P8 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trbv13-1A0A0B4J1P8 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trbv13-1A0A0B4J1P8 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Trbv13-1A0A0B4J1P8 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trbv13-1A0A0B4J1P8 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trbv13-1A0A0B4J1P8 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC12.26□□□□□ -0.45
Trbv13-1A0A0B4J1P8 Gm11620-201ENSMUST00000118770 1845 ntBASIC12.26□□□□□ -0.45
Trbv13-1A0A0B4J1P8 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Trbv13-1A0A0B4J1P8 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Trbv13-1A0A0B4J1P8 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Trbv13-1A0A0B4J1P8 Gm7370-201ENSMUST00000219471 767 ntBASIC12.26□□□□□ -0.45
Trbv13-1A0A0B4J1P8 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trbv13-1A0A0B4J1P8 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trbv13-1A0A0B4J1P8 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trbv13-1A0A0B4J1P8 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trbv13-1A0A0B4J1P8 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trbv13-1A0A0B4J1P8 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
Trbv13-1A0A0B4J1P8 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC12.26□□□□□ -0.45
Trbv13-1A0A0B4J1P8 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trbv13-1A0A0B4J1P8 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trbv13-1A0A0B4J1P8 Dancr-204ENSMUST00000132389 2347 ntBASIC12.26□□□□□ -0.45
Trbv13-1A0A0B4J1P8 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Trbv13-1A0A0B4J1P8 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trbv13-1A0A0B4J1P8 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Trbv13-1A0A0B4J1P8 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trbv13-1A0A0B4J1P8 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trbv13-1A0A0B4J1P8 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC12.25□□□□□ -0.45
Trbv13-1A0A0B4J1P8 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trbv13-1A0A0B4J1P8 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC12.25□□□□□ -0.45
Trbv13-1A0A0B4J1P8 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trbv13-1A0A0B4J1P8 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trbv13-1A0A0B4J1P8 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Trbv13-1A0A0B4J1P8 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Trbv13-1A0A0B4J1P8 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC12.25□□□□□ -0.45
Trbv13-1A0A0B4J1P8 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC12.25□□□□□ -0.45
Trbv13-1A0A0B4J1P8 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Trbv13-1A0A0B4J1P8 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Trbv13-1A0A0B4J1P8 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC12.25□□□□□ -0.45
Trbv13-1A0A0B4J1P8 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trbv13-1A0A0B4J1P8 Gm17661-201ENSMUST00000170317 270 ntBASIC12.25□□□□□ -0.45
Trbv13-1A0A0B4J1P8 Gm27389-201ENSMUST00000183622 195 ntBASIC12.25□□□□□ -0.45
Trbv13-1A0A0B4J1P8 Gm21362-201ENSMUST00000194272 928 ntBASIC12.25□□□□□ -0.45
Trbv13-1A0A0B4J1P8 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trbv13-1A0A0B4J1P8 Gm7367-201ENSMUST00000057611 492 ntBASIC12.25□□□□□ -0.45
Trbv13-1A0A0B4J1P8 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trbv13-1A0A0B4J1P8 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Trbv13-1A0A0B4J1P8 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Trbv13-1A0A0B4J1P8 Spsb2-203ENSMUST00000112473 1322 ntBASIC12.25□□□□□ -0.45
Trbv13-1A0A0B4J1P8 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC12.25□□□□□ -0.45
Trbv13-1A0A0B4J1P8 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trbv13-1A0A0B4J1P8 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trbv13-1A0A0B4J1P8 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 23.9 ms