Protein–RNA interactions for Protein: A0A0B4J1K2

Trav9-4, T cell receptor alpha variable 9-4 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9-4A0A0B4J1K2 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav9-4A0A0B4J1K2 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav9-4A0A0B4J1K2 Zfp264-201ENSMUST00000208656 1563 ntBASIC12.34□□□□□ -0.43
Trav9-4A0A0B4J1K2 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav9-4A0A0B4J1K2 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
Trav9-4A0A0B4J1K2 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Trav9-4A0A0B4J1K2 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Trav9-4A0A0B4J1K2 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav9-4A0A0B4J1K2 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav9-4A0A0B4J1K2 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Trav9-4A0A0B4J1K2 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav9-4A0A0B4J1K2 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC12.33□□□□□ -0.43
Trav9-4A0A0B4J1K2 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Trav9-4A0A0B4J1K2 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Trav9-4A0A0B4J1K2 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav9-4A0A0B4J1K2 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC12.33□□□□□ -0.44
Trav9-4A0A0B4J1K2 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav9-4A0A0B4J1K2 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav9-4A0A0B4J1K2 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav9-4A0A0B4J1K2 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Trav9-4A0A0B4J1K2 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Trav9-4A0A0B4J1K2 Gm13216-201ENSMUST00000117145 591 ntBASIC12.33□□□□□ -0.44
Trav9-4A0A0B4J1K2 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav9-4A0A0B4J1K2 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC12.33□□□□□ -0.44
Trav9-4A0A0B4J1K2 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Trav9-4A0A0B4J1K2 Gm23634-201ENSMUST00000175071 91 ntBASIC12.33□□□□□ -0.44
Trav9-4A0A0B4J1K2 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav9-4A0A0B4J1K2 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC12.33□□□□□ -0.44
Trav9-4A0A0B4J1K2 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav9-4A0A0B4J1K2 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav9-4A0A0B4J1K2 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav9-4A0A0B4J1K2 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav9-4A0A0B4J1K2 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Trav9-4A0A0B4J1K2 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Trav9-4A0A0B4J1K2 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav9-4A0A0B4J1K2 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC12.33□□□□□ -0.44
Trav9-4A0A0B4J1K2 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav9-4A0A0B4J1K2 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav9-4A0A0B4J1K2 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav9-4A0A0B4J1K2 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav9-4A0A0B4J1K2 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav9-4A0A0B4J1K2 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav9-4A0A0B4J1K2 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav9-4A0A0B4J1K2 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Trav9-4A0A0B4J1K2 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav9-4A0A0B4J1K2 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Trav9-4A0A0B4J1K2 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav9-4A0A0B4J1K2 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Trav9-4A0A0B4J1K2 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Trav9-4A0A0B4J1K2 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav9-4A0A0B4J1K2 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav9-4A0A0B4J1K2 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav9-4A0A0B4J1K2 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav9-4A0A0B4J1K2 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Trav9-4A0A0B4J1K2 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav9-4A0A0B4J1K2 Gm6659-201ENSMUST00000174752 547 ntBASIC12.32□□□□□ -0.44
Trav9-4A0A0B4J1K2 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC12.32□□□□□ -0.44
Trav9-4A0A0B4J1K2 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC12.32□□□□□ -0.44
Trav9-4A0A0B4J1K2 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Trav9-4A0A0B4J1K2 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav9-4A0A0B4J1K2 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav9-4A0A0B4J1K2 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav9-4A0A0B4J1K2 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Trav9-4A0A0B4J1K2 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav9-4A0A0B4J1K2 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav9-4A0A0B4J1K2 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Trav9-4A0A0B4J1K2 Cxcl14-202ENSMUST00000224801 1467 ntBASIC12.32□□□□□ -0.44
Trav9-4A0A0B4J1K2 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav9-4A0A0B4J1K2 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav9-4A0A0B4J1K2 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav9-4A0A0B4J1K2 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav9-4A0A0B4J1K2 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav9-4A0A0B4J1K2 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav9-4A0A0B4J1K2 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav9-4A0A0B4J1K2 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav9-4A0A0B4J1K2 Gm45244-201ENSMUST00000211328 2200 ntBASIC12.31□□□□□ -0.44
Trav9-4A0A0B4J1K2 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav9-4A0A0B4J1K2 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Trav9-4A0A0B4J1K2 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav9-4A0A0B4J1K2 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC12.31□□□□□ -0.44
Trav9-4A0A0B4J1K2 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav9-4A0A0B4J1K2 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav9-4A0A0B4J1K2 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav9-4A0A0B4J1K2 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Trav9-4A0A0B4J1K2 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC12.31□□□□□ -0.44
Trav9-4A0A0B4J1K2 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav9-4A0A0B4J1K2 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
Trav9-4A0A0B4J1K2 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav9-4A0A0B4J1K2 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav9-4A0A0B4J1K2 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC12.31□□□□□ -0.44
Trav9-4A0A0B4J1K2 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav9-4A0A0B4J1K2 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Trav9-4A0A0B4J1K2 Zkscan3-208ENSMUST00000224820 5398 ntBASIC12.31□□□□□ -0.44
Trav9-4A0A0B4J1K2 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav9-4A0A0B4J1K2 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
Trav9-4A0A0B4J1K2 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav9-4A0A0B4J1K2 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav9-4A0A0B4J1K2 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Trav9-4A0A0B4J1K2 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav9-4A0A0B4J1K2 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 25.8 ms