Protein–RNA interactions for Protein: A0A0B4J1H3

Trbv16, T cell receptor beta, variable 16 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv16A0A0B4J1H3 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trbv16A0A0B4J1H3 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trbv16A0A0B4J1H3 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trbv16A0A0B4J1H3 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Trbv16A0A0B4J1H3 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
Trbv16A0A0B4J1H3 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trbv16A0A0B4J1H3 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trbv16A0A0B4J1H3 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Trbv16A0A0B4J1H3 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Trbv16A0A0B4J1H3 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC11.9□□□□□ -0.5
Trbv16A0A0B4J1H3 AC159205.3-201ENSMUST00000224614 874 ntBASIC11.9□□□□□ -0.5
Trbv16A0A0B4J1H3 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trbv16A0A0B4J1H3 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trbv16A0A0B4J1H3 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC11.9□□□□□ -0.5
Trbv16A0A0B4J1H3 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Trbv16A0A0B4J1H3 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Trbv16A0A0B4J1H3 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trbv16A0A0B4J1H3 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trbv16A0A0B4J1H3 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Trbv16A0A0B4J1H3 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Trbv16A0A0B4J1H3 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
Trbv16A0A0B4J1H3 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC11.9□□□□□ -0.5
Trbv16A0A0B4J1H3 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trbv16A0A0B4J1H3 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trbv16A0A0B4J1H3 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trbv16A0A0B4J1H3 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Trbv16A0A0B4J1H3 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC11.9□□□□□ -0.51
Trbv16A0A0B4J1H3 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Trbv16A0A0B4J1H3 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC11.89□□□□□ -0.51
Trbv16A0A0B4J1H3 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trbv16A0A0B4J1H3 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trbv16A0A0B4J1H3 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trbv16A0A0B4J1H3 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trbv16A0A0B4J1H3 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Trbv16A0A0B4J1H3 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Trbv16A0A0B4J1H3 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Trbv16A0A0B4J1H3 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trbv16A0A0B4J1H3 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Trbv16A0A0B4J1H3 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Trbv16A0A0B4J1H3 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trbv16A0A0B4J1H3 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC11.89□□□□□ -0.51
Trbv16A0A0B4J1H3 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC11.89□□□□□ -0.51
Trbv16A0A0B4J1H3 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Trbv16A0A0B4J1H3 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trbv16A0A0B4J1H3 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trbv16A0A0B4J1H3 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trbv16A0A0B4J1H3 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Trbv16A0A0B4J1H3 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC11.89□□□□□ -0.51
Trbv16A0A0B4J1H3 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trbv16A0A0B4J1H3 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trbv16A0A0B4J1H3 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC11.89□□□□□ -0.51
Trbv16A0A0B4J1H3 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trbv16A0A0B4J1H3 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trbv16A0A0B4J1H3 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC11.89□□□□□ -0.51
Trbv16A0A0B4J1H3 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trbv16A0A0B4J1H3 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC11.89□□□□□ -0.51
Trbv16A0A0B4J1H3 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trbv16A0A0B4J1H3 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trbv16A0A0B4J1H3 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC11.89□□□□□ -0.51
Trbv16A0A0B4J1H3 Gm19430-201ENSMUST00000193847 2137 ntBASIC11.89□□□□□ -0.51
Trbv16A0A0B4J1H3 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trbv16A0A0B4J1H3 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trbv16A0A0B4J1H3 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Trbv16A0A0B4J1H3 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trbv16A0A0B4J1H3 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trbv16A0A0B4J1H3 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trbv16A0A0B4J1H3 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Trbv16A0A0B4J1H3 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trbv16A0A0B4J1H3 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trbv16A0A0B4J1H3 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trbv16A0A0B4J1H3 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trbv16A0A0B4J1H3 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trbv16A0A0B4J1H3 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Trbv16A0A0B4J1H3 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trbv16A0A0B4J1H3 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC11.88□□□□□ -0.51
Trbv16A0A0B4J1H3 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC11.88□□□□□ -0.51
Trbv16A0A0B4J1H3 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trbv16A0A0B4J1H3 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trbv16A0A0B4J1H3 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Trbv16A0A0B4J1H3 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC11.88□□□□□ -0.51
Trbv16A0A0B4J1H3 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trbv16A0A0B4J1H3 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC11.88□□□□□ -0.51
Trbv16A0A0B4J1H3 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trbv16A0A0B4J1H3 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Trbv16A0A0B4J1H3 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trbv16A0A0B4J1H3 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trbv16A0A0B4J1H3 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trbv16A0A0B4J1H3 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Trbv16A0A0B4J1H3 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trbv16A0A0B4J1H3 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trbv16A0A0B4J1H3 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trbv16A0A0B4J1H3 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trbv16A0A0B4J1H3 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trbv16A0A0B4J1H3 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trbv16A0A0B4J1H3 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trbv16A0A0B4J1H3 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trbv16A0A0B4J1H3 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Trbv16A0A0B4J1H3 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trbv16A0A0B4J1H3 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trbv16A0A0B4J1H3 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 40.5 ms