Protein–RNA interactions for Protein: A0A0B4J1H0

Trbv12-1, T cell receptor beta, variable 12-1 (Fragment), mousemouse

Predictions only

Length 124 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv12-1A0A0B4J1H0 AC154471.1-201ENSMUST00000224418 436 ntBASIC14.49□□□□□ -0.09
Trbv12-1A0A0B4J1H0 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trbv12-1A0A0B4J1H0 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC14.49□□□□□ -0.09
Trbv12-1A0A0B4J1H0 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trbv12-1A0A0B4J1H0 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trbv12-1A0A0B4J1H0 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Trbv12-1A0A0B4J1H0 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trbv12-1A0A0B4J1H0 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trbv12-1A0A0B4J1H0 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trbv12-1A0A0B4J1H0 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
Trbv12-1A0A0B4J1H0 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Trbv12-1A0A0B4J1H0 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trbv12-1A0A0B4J1H0 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
Trbv12-1A0A0B4J1H0 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Trbv12-1A0A0B4J1H0 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
Trbv12-1A0A0B4J1H0 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trbv12-1A0A0B4J1H0 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC14.48□□□□□ -0.09
Trbv12-1A0A0B4J1H0 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Trbv12-1A0A0B4J1H0 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trbv12-1A0A0B4J1H0 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trbv12-1A0A0B4J1H0 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trbv12-1A0A0B4J1H0 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trbv12-1A0A0B4J1H0 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trbv12-1A0A0B4J1H0 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC14.48□□□□□ -0.09
Trbv12-1A0A0B4J1H0 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trbv12-1A0A0B4J1H0 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trbv12-1A0A0B4J1H0 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC14.48□□□□□ -0.09
Trbv12-1A0A0B4J1H0 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trbv12-1A0A0B4J1H0 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
Trbv12-1A0A0B4J1H0 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trbv12-1A0A0B4J1H0 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trbv12-1A0A0B4J1H0 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC14.48□□□□□ -0.09
Trbv12-1A0A0B4J1H0 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trbv12-1A0A0B4J1H0 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Trbv12-1A0A0B4J1H0 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
Trbv12-1A0A0B4J1H0 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
Trbv12-1A0A0B4J1H0 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trbv12-1A0A0B4J1H0 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
Trbv12-1A0A0B4J1H0 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
Trbv12-1A0A0B4J1H0 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trbv12-1A0A0B4J1H0 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
Trbv12-1A0A0B4J1H0 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trbv12-1A0A0B4J1H0 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trbv12-1A0A0B4J1H0 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trbv12-1A0A0B4J1H0 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC14.47□□□□□ -0.09
Trbv12-1A0A0B4J1H0 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trbv12-1A0A0B4J1H0 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Trbv12-1A0A0B4J1H0 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC14.47□□□□□ -0.09
Trbv12-1A0A0B4J1H0 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC14.47□□□□□ -0.09
Trbv12-1A0A0B4J1H0 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trbv12-1A0A0B4J1H0 CT009713.7-201ENSMUST00000224689 571 ntBASIC14.47□□□□□ -0.09
Trbv12-1A0A0B4J1H0 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
Trbv12-1A0A0B4J1H0 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
Trbv12-1A0A0B4J1H0 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trbv12-1A0A0B4J1H0 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Trbv12-1A0A0B4J1H0 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trbv12-1A0A0B4J1H0 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trbv12-1A0A0B4J1H0 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
Trbv12-1A0A0B4J1H0 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Trbv12-1A0A0B4J1H0 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trbv12-1A0A0B4J1H0 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trbv12-1A0A0B4J1H0 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
Trbv12-1A0A0B4J1H0 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trbv12-1A0A0B4J1H0 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trbv12-1A0A0B4J1H0 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trbv12-1A0A0B4J1H0 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
Trbv12-1A0A0B4J1H0 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Trbv12-1A0A0B4J1H0 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trbv12-1A0A0B4J1H0 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trbv12-1A0A0B4J1H0 Gm43072-201ENSMUST00000200283 1671 ntBASIC14.46□□□□□ -0.09
Trbv12-1A0A0B4J1H0 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trbv12-1A0A0B4J1H0 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC14.46□□□□□ -0.09
Trbv12-1A0A0B4J1H0 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Trbv12-1A0A0B4J1H0 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Trbv12-1A0A0B4J1H0 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trbv12-1A0A0B4J1H0 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
Trbv12-1A0A0B4J1H0 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Trbv12-1A0A0B4J1H0 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trbv12-1A0A0B4J1H0 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Trbv12-1A0A0B4J1H0 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
Trbv12-1A0A0B4J1H0 Gm27742-201ENSMUST00000184667 60 ntBASIC14.46□□□□□ -0.09
Trbv12-1A0A0B4J1H0 Gm27704-201ENSMUST00000185094 107 ntBASIC14.46□□□□□ -0.09
Trbv12-1A0A0B4J1H0 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
Trbv12-1A0A0B4J1H0 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Trbv12-1A0A0B4J1H0 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trbv12-1A0A0B4J1H0 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Trbv12-1A0A0B4J1H0 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trbv12-1A0A0B4J1H0 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trbv12-1A0A0B4J1H0 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Trbv12-1A0A0B4J1H0 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Trbv12-1A0A0B4J1H0 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Trbv12-1A0A0B4J1H0 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.1
Trbv12-1A0A0B4J1H0 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC14.46□□□□□ -0.1
Trbv12-1A0A0B4J1H0 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
Trbv12-1A0A0B4J1H0 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Trbv12-1A0A0B4J1H0 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC14.46□□□□□ -0.1
Trbv12-1A0A0B4J1H0 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Trbv12-1A0A0B4J1H0 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Trbv12-1A0A0B4J1H0 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.1
Trbv12-1A0A0B4J1H0 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC14.46□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 24 ms