Protein–RNA interactions for Protein: A0A0A6YXN5

Ighv1-43, Immunoglobulin heavy variable V1-43 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-43A0A0A6YXN5 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ighv1-43A0A0A6YXN5 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Ighv1-43A0A0A6YXN5 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Ighv1-43A0A0A6YXN5 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
Ighv1-43A0A0A6YXN5 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Ighv1-43A0A0A6YXN5 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ighv1-43A0A0A6YXN5 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC15.13■□□□□ 0.01
Ighv1-43A0A0A6YXN5 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ighv1-43A0A0A6YXN5 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Ighv1-43A0A0A6YXN5 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC15.13■□□□□ 0.01
Ighv1-43A0A0A6YXN5 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ighv1-43A0A0A6YXN5 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Ighv1-43A0A0A6YXN5 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC15.13■□□□□ 0.01
Ighv1-43A0A0A6YXN5 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ighv1-43A0A0A6YXN5 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Ighv1-43A0A0A6YXN5 Gm27867-201ENSMUST00000184778 125 ntBASIC15.13■□□□□ 0.01
Ighv1-43A0A0A6YXN5 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC15.13■□□□□ 0.01
Ighv1-43A0A0A6YXN5 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ighv1-43A0A0A6YXN5 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Ighv1-43A0A0A6YXN5 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ighv1-43A0A0A6YXN5 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ighv1-43A0A0A6YXN5 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Ighv1-43A0A0A6YXN5 Gm5898-201ENSMUST00000121016 2071 ntBASIC15.13■□□□□ 0.01
Ighv1-43A0A0A6YXN5 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ighv1-43A0A0A6YXN5 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ighv1-43A0A0A6YXN5 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Ighv1-43A0A0A6YXN5 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Ighv1-43A0A0A6YXN5 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ighv1-43A0A0A6YXN5 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Ighv1-43A0A0A6YXN5 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC15.12■□□□□ 0.01
Ighv1-43A0A0A6YXN5 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC15.12■□□□□ 0.01
Ighv1-43A0A0A6YXN5 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC15.12■□□□□ 0.01
Ighv1-43A0A0A6YXN5 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Ighv1-43A0A0A6YXN5 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
Ighv1-43A0A0A6YXN5 Gm5864-201ENSMUST00000202263 970 ntBASIC15.12■□□□□ 0.01
Ighv1-43A0A0A6YXN5 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Ighv1-43A0A0A6YXN5 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ighv1-43A0A0A6YXN5 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ighv1-43A0A0A6YXN5 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ighv1-43A0A0A6YXN5 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ighv1-43A0A0A6YXN5 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Ighv1-43A0A0A6YXN5 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ighv1-43A0A0A6YXN5 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ighv1-43A0A0A6YXN5 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ighv1-43A0A0A6YXN5 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
Ighv1-43A0A0A6YXN5 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ighv1-43A0A0A6YXN5 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC15.11■□□□□ 0.01
Ighv1-43A0A0A6YXN5 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ighv1-43A0A0A6YXN5 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ighv1-43A0A0A6YXN5 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC15.11■□□□□ 0.01
Ighv1-43A0A0A6YXN5 AC133598.3-202ENSMUST00000224219 531 ntBASIC15.11■□□□□ 0.01
Ighv1-43A0A0A6YXN5 Cmtm5-203ENSMUST00000227441 610 ntBASIC15.11■□□□□ 0.01
Ighv1-43A0A0A6YXN5 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ighv1-43A0A0A6YXN5 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ighv1-43A0A0A6YXN5 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ighv1-43A0A0A6YXN5 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Ighv1-43A0A0A6YXN5 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Ighv1-43A0A0A6YXN5 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ighv1-43A0A0A6YXN5 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ighv1-43A0A0A6YXN5 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ighv1-43A0A0A6YXN5 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ighv1-43A0A0A6YXN5 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ighv1-43A0A0A6YXN5 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ighv1-43A0A0A6YXN5 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Ighv1-43A0A0A6YXN5 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Ighv1-43A0A0A6YXN5 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ighv1-43A0A0A6YXN5 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC15.1■□□□□ 0.01
Ighv1-43A0A0A6YXN5 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Ighv1-43A0A0A6YXN5 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Ighv1-43A0A0A6YXN5 Gm6598-201ENSMUST00000202719 2615 ntBASIC15.1■□□□□ 0.01
Ighv1-43A0A0A6YXN5 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC15.1■□□□□ 0.01
Ighv1-43A0A0A6YXN5 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC15.1■□□□□ 0.01
Ighv1-43A0A0A6YXN5 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC15.1■□□□□ 0.01
Ighv1-43A0A0A6YXN5 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC15.1■□□□□ 0.01
Ighv1-43A0A0A6YXN5 Mzt1-203ENSMUST00000227948 952 ntBASIC15.1■□□□□ 0.01
Ighv1-43A0A0A6YXN5 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ighv1-43A0A0A6YXN5 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ighv1-43A0A0A6YXN5 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ighv1-43A0A0A6YXN5 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC15.1■□□□□ 0.01
Ighv1-43A0A0A6YXN5 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
Ighv1-43A0A0A6YXN5 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ighv1-43A0A0A6YXN5 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
Ighv1-43A0A0A6YXN5 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ighv1-43A0A0A6YXN5 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Ighv1-43A0A0A6YXN5 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ighv1-43A0A0A6YXN5 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ighv1-43A0A0A6YXN5 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ighv1-43A0A0A6YXN5 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ighv1-43A0A0A6YXN5 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ighv1-43A0A0A6YXN5 Gm32996-201ENSMUST00000199828 1447 ntBASIC15.09■□□□□ 0.01
Ighv1-43A0A0A6YXN5 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ighv1-43A0A0A6YXN5 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ighv1-43A0A0A6YXN5 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ighv1-43A0A0A6YXN5 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ighv1-43A0A0A6YXN5 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
Ighv1-43A0A0A6YXN5 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC15.09■□□□□ 0.01
Ighv1-43A0A0A6YXN5 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ighv1-43A0A0A6YXN5 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Ighv1-43A0A0A6YXN5 Gm13884-201ENSMUST00000118103 829 ntBASIC15.09■□□□□ 0.01
Ighv1-43A0A0A6YXN5 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 15.4 ms