Protein–RNA interactions for Protein: A0A0A6YWX0

Ighv1-19, Immunoglobulin heavy variable V1-19 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-19A0A0A6YWX0 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC13□□□□□ -0.33
Ighv1-19A0A0A6YWX0 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC13□□□□□ -0.33
Ighv1-19A0A0A6YWX0 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Ighv1-19A0A0A6YWX0 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Ighv1-19A0A0A6YWX0 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC13□□□□□ -0.33
Ighv1-19A0A0A6YWX0 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Ighv1-19A0A0A6YWX0 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Ighv1-19A0A0A6YWX0 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC13□□□□□ -0.33
Ighv1-19A0A0A6YWX0 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Ighv1-19A0A0A6YWX0 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Ighv1-19A0A0A6YWX0 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Ighv1-19A0A0A6YWX0 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC13□□□□□ -0.33
Ighv1-19A0A0A6YWX0 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC13□□□□□ -0.33
Ighv1-19A0A0A6YWX0 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Ighv1-19A0A0A6YWX0 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Ighv1-19A0A0A6YWX0 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC13□□□□□ -0.33
Ighv1-19A0A0A6YWX0 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Ighv1-19A0A0A6YWX0 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Ighv1-19A0A0A6YWX0 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Ighv1-19A0A0A6YWX0 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Ighv1-19A0A0A6YWX0 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ighv1-19A0A0A6YWX0 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ighv1-19A0A0A6YWX0 Gm44616-201ENSMUST00000206417 1732 ntBASIC12.99□□□□□ -0.33
Ighv1-19A0A0A6YWX0 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC12.99□□□□□ -0.33
Ighv1-19A0A0A6YWX0 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Ighv1-19A0A0A6YWX0 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ighv1-19A0A0A6YWX0 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ighv1-19A0A0A6YWX0 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ighv1-19A0A0A6YWX0 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ighv1-19A0A0A6YWX0 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ighv1-19A0A0A6YWX0 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ighv1-19A0A0A6YWX0 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ighv1-19A0A0A6YWX0 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ighv1-19A0A0A6YWX0 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC12.99□□□□□ -0.33
Ighv1-19A0A0A6YWX0 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Ighv1-19A0A0A6YWX0 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC12.99□□□□□ -0.33
Ighv1-19A0A0A6YWX0 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC12.99□□□□□ -0.33
Ighv1-19A0A0A6YWX0 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ighv1-19A0A0A6YWX0 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ighv1-19A0A0A6YWX0 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ighv1-19A0A0A6YWX0 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Ighv1-19A0A0A6YWX0 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Ighv1-19A0A0A6YWX0 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ighv1-19A0A0A6YWX0 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC12.99□□□□□ -0.33
Ighv1-19A0A0A6YWX0 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Ighv1-19A0A0A6YWX0 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ighv1-19A0A0A6YWX0 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ighv1-19A0A0A6YWX0 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ighv1-19A0A0A6YWX0 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ighv1-19A0A0A6YWX0 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ighv1-19A0A0A6YWX0 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ighv1-19A0A0A6YWX0 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ighv1-19A0A0A6YWX0 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ighv1-19A0A0A6YWX0 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ighv1-19A0A0A6YWX0 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Ighv1-19A0A0A6YWX0 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ighv1-19A0A0A6YWX0 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ighv1-19A0A0A6YWX0 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Ighv1-19A0A0A6YWX0 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC12.98□□□□□ -0.33
Ighv1-19A0A0A6YWX0 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC12.98□□□□□ -0.33
Ighv1-19A0A0A6YWX0 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC12.98□□□□□ -0.33
Ighv1-19A0A0A6YWX0 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
Ighv1-19A0A0A6YWX0 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ighv1-19A0A0A6YWX0 Ntrk2-205ENSMUST00000224402 2284 ntBASIC12.98□□□□□ -0.33
Ighv1-19A0A0A6YWX0 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC12.98□□□□□ -0.33
Ighv1-19A0A0A6YWX0 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ighv1-19A0A0A6YWX0 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ighv1-19A0A0A6YWX0 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
Ighv1-19A0A0A6YWX0 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ighv1-19A0A0A6YWX0 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC12.98□□□□□ -0.33
Ighv1-19A0A0A6YWX0 AC153526.5-201ENSMUST00000218661 2147 ntBASIC12.98□□□□□ -0.33
Ighv1-19A0A0A6YWX0 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Ighv1-19A0A0A6YWX0 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
Ighv1-19A0A0A6YWX0 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ighv1-19A0A0A6YWX0 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ighv1-19A0A0A6YWX0 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Ighv1-19A0A0A6YWX0 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ighv1-19A0A0A6YWX0 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ighv1-19A0A0A6YWX0 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ighv1-19A0A0A6YWX0 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ighv1-19A0A0A6YWX0 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Ighv1-19A0A0A6YWX0 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ighv1-19A0A0A6YWX0 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ighv1-19A0A0A6YWX0 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Ighv1-19A0A0A6YWX0 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Ighv1-19A0A0A6YWX0 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ighv1-19A0A0A6YWX0 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ighv1-19A0A0A6YWX0 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Ighv1-19A0A0A6YWX0 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ighv1-19A0A0A6YWX0 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC12.97□□□□□ -0.33
Ighv1-19A0A0A6YWX0 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Ighv1-19A0A0A6YWX0 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Ighv1-19A0A0A6YWX0 Gm22240-201ENSMUST00000175225 82 ntBASIC12.97□□□□□ -0.33
Ighv1-19A0A0A6YWX0 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Ighv1-19A0A0A6YWX0 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ighv1-19A0A0A6YWX0 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Ighv1-19A0A0A6YWX0 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ighv1-19A0A0A6YWX0 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ighv1-19A0A0A6YWX0 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ighv1-19A0A0A6YWX0 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 19.6 ms