Protein–RNA interactions for Protein: A0A0A6YWV4

Trbc1, T cell receptor beta, constant region 1 (Fragment), mousemouse

Predictions only

Length 173 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbc1A0A0A6YWV4 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Trbc1A0A0A6YWV4 Gm18115-201ENSMUST00000221209 621 ntBASIC15.1■□□□□ 0.01
Trbc1A0A0A6YWV4 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trbc1A0A0A6YWV4 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trbc1A0A0A6YWV4 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trbc1A0A0A6YWV4 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trbc1A0A0A6YWV4 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Trbc1A0A0A6YWV4 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Trbc1A0A0A6YWV4 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trbc1A0A0A6YWV4 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
Trbc1A0A0A6YWV4 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Trbc1A0A0A6YWV4 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trbc1A0A0A6YWV4 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Trbc1A0A0A6YWV4 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Trbc1A0A0A6YWV4 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trbc1A0A0A6YWV4 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trbc1A0A0A6YWV4 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Trbc1A0A0A6YWV4 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
Trbc1A0A0A6YWV4 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trbc1A0A0A6YWV4 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trbc1A0A0A6YWV4 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
Trbc1A0A0A6YWV4 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trbc1A0A0A6YWV4 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trbc1A0A0A6YWV4 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC15.09■□□□□ 0.01
Trbc1A0A0A6YWV4 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC15.09■□□□□ 0.01
Trbc1A0A0A6YWV4 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Trbc1A0A0A6YWV4 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC15.09■□□□□ 0.01
Trbc1A0A0A6YWV4 Gm37722-201ENSMUST00000193757 208 ntBASIC15.09■□□□□ 0.01
Trbc1A0A0A6YWV4 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trbc1A0A0A6YWV4 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
Trbc1A0A0A6YWV4 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trbc1A0A0A6YWV4 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
Trbc1A0A0A6YWV4 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
Trbc1A0A0A6YWV4 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trbc1A0A0A6YWV4 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trbc1A0A0A6YWV4 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trbc1A0A0A6YWV4 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trbc1A0A0A6YWV4 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
Trbc1A0A0A6YWV4 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trbc1A0A0A6YWV4 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trbc1A0A0A6YWV4 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trbc1A0A0A6YWV4 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
Trbc1A0A0A6YWV4 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Trbc1A0A0A6YWV4 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Trbc1A0A0A6YWV4 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Trbc1A0A0A6YWV4 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC15.08■□□□□ 0.01
Trbc1A0A0A6YWV4 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Trbc1A0A0A6YWV4 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Trbc1A0A0A6YWV4 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
Trbc1A0A0A6YWV4 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
Trbc1A0A0A6YWV4 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Trbc1A0A0A6YWV4 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Trbc1A0A0A6YWV4 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC15.08■□□□□ 0
Trbc1A0A0A6YWV4 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC15.08■□□□□ 0
Trbc1A0A0A6YWV4 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC15.08■□□□□ 0
Trbc1A0A0A6YWV4 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC15.08■□□□□ 0
Trbc1A0A0A6YWV4 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Trbc1A0A0A6YWV4 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC15.08■□□□□ 0
Trbc1A0A0A6YWV4 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC15.08■□□□□ 0
Trbc1A0A0A6YWV4 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC15.08■□□□□ 0
Trbc1A0A0A6YWV4 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC15.08■□□□□ 0
Trbc1A0A0A6YWV4 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Trbc1A0A0A6YWV4 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Trbc1A0A0A6YWV4 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Trbc1A0A0A6YWV4 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC15.08■□□□□ 0
Trbc1A0A0A6YWV4 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Trbc1A0A0A6YWV4 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Trbc1A0A0A6YWV4 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC15.08■□□□□ 0
Trbc1A0A0A6YWV4 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Trbc1A0A0A6YWV4 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Trbc1A0A0A6YWV4 Gm11620-201ENSMUST00000118770 1845 ntBASIC15.08■□□□□ 0
Trbc1A0A0A6YWV4 Wnt10b-204ENSMUST00000226655 1807 ntBASIC15.08■□□□□ 0
Trbc1A0A0A6YWV4 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC15.08■□□□□ 0
Trbc1A0A0A6YWV4 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC15.08■□□□□ 0
Trbc1A0A0A6YWV4 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC15.08■□□□□ 0
Trbc1A0A0A6YWV4 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Trbc1A0A0A6YWV4 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Trbc1A0A0A6YWV4 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
Trbc1A0A0A6YWV4 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC15.07■□□□□ 0
Trbc1A0A0A6YWV4 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC15.07■□□□□ 0
Trbc1A0A0A6YWV4 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trbc1A0A0A6YWV4 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trbc1A0A0A6YWV4 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
Trbc1A0A0A6YWV4 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
Trbc1A0A0A6YWV4 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC15.07■□□□□ 0
Trbc1A0A0A6YWV4 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
Trbc1A0A0A6YWV4 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC15.07■□□□□ 0
Trbc1A0A0A6YWV4 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trbc1A0A0A6YWV4 Gm6345-202ENSMUST00000180900 204 ntBASIC15.07■□□□□ 0
Trbc1A0A0A6YWV4 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trbc1A0A0A6YWV4 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC15.07■□□□□ 0
Trbc1A0A0A6YWV4 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trbc1A0A0A6YWV4 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC15.07■□□□□ 0
Trbc1A0A0A6YWV4 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC15.07■□□□□ 0
Trbc1A0A0A6YWV4 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trbc1A0A0A6YWV4 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC15.07■□□□□ 0
Trbc1A0A0A6YWV4 Phf7-203ENSMUST00000226565 1971 ntBASIC15.07■□□□□ 0
Trbc1A0A0A6YWV4 Gm8258-201ENSMUST00000055593 1449 ntBASIC15.07■□□□□ 0
Trbc1A0A0A6YWV4 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trbc1A0A0A6YWV4 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Retrieved 100 of 76,532 protein–RNA pairs in 36.9 ms