Protein–RNA interactions for Protein: A0A0A6YWQ1

Trbv23, T cell receptor beta, variable V23 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv23A0A0A6YWQ1 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Trbv23A0A0A6YWQ1 Gm22240-201ENSMUST00000175225 82 ntBASIC14.16□□□□□ -0.14
Trbv23A0A0A6YWQ1 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC14.16□□□□□ -0.14
Trbv23A0A0A6YWQ1 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC14.16□□□□□ -0.14
Trbv23A0A0A6YWQ1 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC14.16□□□□□ -0.14
Trbv23A0A0A6YWQ1 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC14.16□□□□□ -0.14
Trbv23A0A0A6YWQ1 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trbv23A0A0A6YWQ1 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC14.16□□□□□ -0.14
Trbv23A0A0A6YWQ1 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trbv23A0A0A6YWQ1 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trbv23A0A0A6YWQ1 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trbv23A0A0A6YWQ1 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Trbv23A0A0A6YWQ1 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trbv23A0A0A6YWQ1 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trbv23A0A0A6YWQ1 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trbv23A0A0A6YWQ1 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Trbv23A0A0A6YWQ1 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trbv23A0A0A6YWQ1 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC14.15□□□□□ -0.14
Trbv23A0A0A6YWQ1 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trbv23A0A0A6YWQ1 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC14.15□□□□□ -0.14
Trbv23A0A0A6YWQ1 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Trbv23A0A0A6YWQ1 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Trbv23A0A0A6YWQ1 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC14.15□□□□□ -0.14
Trbv23A0A0A6YWQ1 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Trbv23A0A0A6YWQ1 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trbv23A0A0A6YWQ1 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Trbv23A0A0A6YWQ1 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Trbv23A0A0A6YWQ1 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trbv23A0A0A6YWQ1 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Trbv23A0A0A6YWQ1 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trbv23A0A0A6YWQ1 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC14.14□□□□□ -0.15
Trbv23A0A0A6YWQ1 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Trbv23A0A0A6YWQ1 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Trbv23A0A0A6YWQ1 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trbv23A0A0A6YWQ1 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trbv23A0A0A6YWQ1 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trbv23A0A0A6YWQ1 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trbv23A0A0A6YWQ1 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Trbv23A0A0A6YWQ1 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC14.14□□□□□ -0.15
Trbv23A0A0A6YWQ1 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Trbv23A0A0A6YWQ1 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trbv23A0A0A6YWQ1 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trbv23A0A0A6YWQ1 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Trbv23A0A0A6YWQ1 Gm6576-201ENSMUST00000169678 883 ntBASIC14.14□□□□□ -0.15
Trbv23A0A0A6YWQ1 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trbv23A0A0A6YWQ1 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Trbv23A0A0A6YWQ1 Gm43183-201ENSMUST00000200632 547 ntBASIC14.14□□□□□ -0.15
Trbv23A0A0A6YWQ1 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Trbv23A0A0A6YWQ1 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC14.14□□□□□ -0.15
Trbv23A0A0A6YWQ1 AC166341.7-201ENSMUST00000221698 126 ntBASIC14.14□□□□□ -0.15
Trbv23A0A0A6YWQ1 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trbv23A0A0A6YWQ1 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trbv23A0A0A6YWQ1 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trbv23A0A0A6YWQ1 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Trbv23A0A0A6YWQ1 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trbv23A0A0A6YWQ1 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Trbv23A0A0A6YWQ1 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trbv23A0A0A6YWQ1 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trbv23A0A0A6YWQ1 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC14.14□□□□□ -0.15
Trbv23A0A0A6YWQ1 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Trbv23A0A0A6YWQ1 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trbv23A0A0A6YWQ1 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC14.14□□□□□ -0.15
Trbv23A0A0A6YWQ1 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trbv23A0A0A6YWQ1 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC14.13□□□□□ -0.15
Trbv23A0A0A6YWQ1 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trbv23A0A0A6YWQ1 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Trbv23A0A0A6YWQ1 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trbv23A0A0A6YWQ1 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trbv23A0A0A6YWQ1 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC14.13□□□□□ -0.15
Trbv23A0A0A6YWQ1 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trbv23A0A0A6YWQ1 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Trbv23A0A0A6YWQ1 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trbv23A0A0A6YWQ1 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Trbv23A0A0A6YWQ1 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trbv23A0A0A6YWQ1 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trbv23A0A0A6YWQ1 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Trbv23A0A0A6YWQ1 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC14.13□□□□□ -0.15
Trbv23A0A0A6YWQ1 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trbv23A0A0A6YWQ1 Gm12382-201ENSMUST00000122005 922 ntBASIC14.13□□□□□ -0.15
Trbv23A0A0A6YWQ1 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC14.13□□□□□ -0.15
Trbv23A0A0A6YWQ1 Gm10698-201ENSMUST00000182663 604 ntBASIC14.13□□□□□ -0.15
Trbv23A0A0A6YWQ1 Gm37292-201ENSMUST00000192062 758 ntBASIC14.13□□□□□ -0.15
Trbv23A0A0A6YWQ1 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trbv23A0A0A6YWQ1 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Trbv23A0A0A6YWQ1 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trbv23A0A0A6YWQ1 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trbv23A0A0A6YWQ1 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trbv23A0A0A6YWQ1 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trbv23A0A0A6YWQ1 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trbv23A0A0A6YWQ1 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trbv23A0A0A6YWQ1 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trbv23A0A0A6YWQ1 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trbv23A0A0A6YWQ1 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trbv23A0A0A6YWQ1 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Trbv23A0A0A6YWQ1 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trbv23A0A0A6YWQ1 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trbv23A0A0A6YWQ1 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trbv23A0A0A6YWQ1 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trbv23A0A0A6YWQ1 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trbv23A0A0A6YWQ1 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 22.6 ms