Protein–RNA interactions for Protein: A0A0A6YW39

Ighv16-1, Immunoglobulin heavy variable 16-1 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv16-1A0A0A6YW39 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ighv16-1A0A0A6YW39 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ighv16-1A0A0A6YW39 Gm26596-201ENSMUST00000180464 2655 ntBASIC15.17■□□□□ 0.02
Ighv16-1A0A0A6YW39 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
Ighv16-1A0A0A6YW39 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ighv16-1A0A0A6YW39 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Ighv16-1A0A0A6YW39 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ighv16-1A0A0A6YW39 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ighv16-1A0A0A6YW39 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ighv16-1A0A0A6YW39 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC15.16■□□□□ 0.02
Ighv16-1A0A0A6YW39 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ighv16-1A0A0A6YW39 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Ighv16-1A0A0A6YW39 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC15.16■□□□□ 0.02
Ighv16-1A0A0A6YW39 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC15.16■□□□□ 0.02
Ighv16-1A0A0A6YW39 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Ighv16-1A0A0A6YW39 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC15.16■□□□□ 0.02
Ighv16-1A0A0A6YW39 Gm7367-201ENSMUST00000057611 492 ntBASIC15.16■□□□□ 0.02
Ighv16-1A0A0A6YW39 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ighv16-1A0A0A6YW39 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ighv16-1A0A0A6YW39 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ighv16-1A0A0A6YW39 Gm8839-201ENSMUST00000121279 1645 ntBASIC15.16■□□□□ 0.02
Ighv16-1A0A0A6YW39 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ighv16-1A0A0A6YW39 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ighv16-1A0A0A6YW39 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Ighv16-1A0A0A6YW39 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC15.16■□□□□ 0.02
Ighv16-1A0A0A6YW39 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
Ighv16-1A0A0A6YW39 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ighv16-1A0A0A6YW39 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ighv16-1A0A0A6YW39 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ighv16-1A0A0A6YW39 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ighv16-1A0A0A6YW39 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Ighv16-1A0A0A6YW39 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Ighv16-1A0A0A6YW39 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ighv16-1A0A0A6YW39 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Ighv16-1A0A0A6YW39 Gm7284-201ENSMUST00000131667 944 ntBASIC15.15■□□□□ 0.02
Ighv16-1A0A0A6YW39 Gm27704-201ENSMUST00000185094 107 ntBASIC15.15■□□□□ 0.02
Ighv16-1A0A0A6YW39 AC154471.1-201ENSMUST00000224418 436 ntBASIC15.15■□□□□ 0.02
Ighv16-1A0A0A6YW39 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ighv16-1A0A0A6YW39 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ighv16-1A0A0A6YW39 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ighv16-1A0A0A6YW39 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ighv16-1A0A0A6YW39 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ighv16-1A0A0A6YW39 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC15.15■□□□□ 0.02
Ighv16-1A0A0A6YW39 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC15.15■□□□□ 0.02
Ighv16-1A0A0A6YW39 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
Ighv16-1A0A0A6YW39 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Ighv16-1A0A0A6YW39 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ighv16-1A0A0A6YW39 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ighv16-1A0A0A6YW39 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
Ighv16-1A0A0A6YW39 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Ighv16-1A0A0A6YW39 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ighv16-1A0A0A6YW39 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ighv16-1A0A0A6YW39 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Ighv16-1A0A0A6YW39 Slc35b2-202ENSMUST00000223987 1766 ntBASIC15.14■□□□□ 0.01
Ighv16-1A0A0A6YW39 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ighv16-1A0A0A6YW39 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ighv16-1A0A0A6YW39 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Ighv16-1A0A0A6YW39 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ighv16-1A0A0A6YW39 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ighv16-1A0A0A6YW39 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC15.14■□□□□ 0.01
Ighv16-1A0A0A6YW39 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ighv16-1A0A0A6YW39 Gm14859-201ENSMUST00000117752 357 ntBASIC15.14■□□□□ 0.01
Ighv16-1A0A0A6YW39 Gm21362-201ENSMUST00000194272 928 ntBASIC15.14■□□□□ 0.01
Ighv16-1A0A0A6YW39 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ighv16-1A0A0A6YW39 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ighv16-1A0A0A6YW39 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ighv16-1A0A0A6YW39 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ighv16-1A0A0A6YW39 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ighv16-1A0A0A6YW39 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Ighv16-1A0A0A6YW39 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ighv16-1A0A0A6YW39 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Ighv16-1A0A0A6YW39 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC15.14■□□□□ 0.01
Ighv16-1A0A0A6YW39 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ighv16-1A0A0A6YW39 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ighv16-1A0A0A6YW39 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ighv16-1A0A0A6YW39 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ighv16-1A0A0A6YW39 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ighv16-1A0A0A6YW39 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
Ighv16-1A0A0A6YW39 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC15.13■□□□□ 0.01
Ighv16-1A0A0A6YW39 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Ighv16-1A0A0A6YW39 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ighv16-1A0A0A6YW39 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ighv16-1A0A0A6YW39 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ighv16-1A0A0A6YW39 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC15.13■□□□□ 0.01
Ighv16-1A0A0A6YW39 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ighv16-1A0A0A6YW39 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC15.13■□□□□ 0.01
Ighv16-1A0A0A6YW39 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
Ighv16-1A0A0A6YW39 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC15.13■□□□□ 0.01
Ighv16-1A0A0A6YW39 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC15.13■□□□□ 0.01
Ighv16-1A0A0A6YW39 Gm45328-201ENSMUST00000210942 917 ntBASIC15.13■□□□□ 0.01
Ighv16-1A0A0A6YW39 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Ighv16-1A0A0A6YW39 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ighv16-1A0A0A6YW39 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ighv16-1A0A0A6YW39 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ighv16-1A0A0A6YW39 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ighv16-1A0A0A6YW39 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ighv16-1A0A0A6YW39 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Ighv16-1A0A0A6YW39 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ighv16-1A0A0A6YW39 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Ighv16-1A0A0A6YW39 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 21.9 ms