Protein–RNA interactions for Protein: A0A075B6B5

Trav6-5, T cell receptor alpha variable 6-5 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-5A0A075B6B5 Gm15710-201ENSMUST00000121821 636 ntBASIC12.76□□□□□ -0.37
Trav6-5A0A075B6B5 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Trav6-5A0A075B6B5 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC12.76□□□□□ -0.37
Trav6-5A0A075B6B5 Gm5075-201ENSMUST00000196916 622 ntBASIC12.76□□□□□ -0.37
Trav6-5A0A075B6B5 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC12.76□□□□□ -0.37
Trav6-5A0A075B6B5 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC12.76□□□□□ -0.37
Trav6-5A0A075B6B5 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC12.76□□□□□ -0.37
Trav6-5A0A075B6B5 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC12.76□□□□□ -0.37
Trav6-5A0A075B6B5 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav6-5A0A075B6B5 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav6-5A0A075B6B5 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Trav6-5A0A075B6B5 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav6-5A0A075B6B5 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav6-5A0A075B6B5 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav6-5A0A075B6B5 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
Trav6-5A0A075B6B5 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Trav6-5A0A075B6B5 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC12.76□□□□□ -0.37
Trav6-5A0A075B6B5 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav6-5A0A075B6B5 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Trav6-5A0A075B6B5 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Trav6-5A0A075B6B5 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav6-5A0A075B6B5 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav6-5A0A075B6B5 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav6-5A0A075B6B5 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav6-5A0A075B6B5 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Trav6-5A0A075B6B5 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Trav6-5A0A075B6B5 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
Trav6-5A0A075B6B5 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Trav6-5A0A075B6B5 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav6-5A0A075B6B5 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav6-5A0A075B6B5 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Trav6-5A0A075B6B5 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav6-5A0A075B6B5 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav6-5A0A075B6B5 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav6-5A0A075B6B5 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav6-5A0A075B6B5 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC12.75□□□□□ -0.37
Trav6-5A0A075B6B5 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav6-5A0A075B6B5 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
Trav6-5A0A075B6B5 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav6-5A0A075B6B5 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav6-5A0A075B6B5 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav6-5A0A075B6B5 Gm6365-201ENSMUST00000054711 744 ntBASIC12.75□□□□□ -0.37
Trav6-5A0A075B6B5 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
Trav6-5A0A075B6B5 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav6-5A0A075B6B5 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav6-5A0A075B6B5 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Trav6-5A0A075B6B5 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav6-5A0A075B6B5 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav6-5A0A075B6B5 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav6-5A0A075B6B5 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav6-5A0A075B6B5 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav6-5A0A075B6B5 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav6-5A0A075B6B5 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Trav6-5A0A075B6B5 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Trav6-5A0A075B6B5 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Trav6-5A0A075B6B5 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav6-5A0A075B6B5 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC12.74□□□□□ -0.37
Trav6-5A0A075B6B5 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav6-5A0A075B6B5 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav6-5A0A075B6B5 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Trav6-5A0A075B6B5 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav6-5A0A075B6B5 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav6-5A0A075B6B5 Gm15847-201ENSMUST00000121417 1065 ntBASIC12.74□□□□□ -0.37
Trav6-5A0A075B6B5 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC12.74□□□□□ -0.37
Trav6-5A0A075B6B5 Gm6211-202ENSMUST00000167849 925 ntBASIC12.74□□□□□ -0.37
Trav6-5A0A075B6B5 Gm17661-201ENSMUST00000170317 270 ntBASIC12.74□□□□□ -0.37
Trav6-5A0A075B6B5 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
Trav6-5A0A075B6B5 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav6-5A0A075B6B5 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav6-5A0A075B6B5 Mtag2-201ENSMUST00000058665 714 ntBASIC12.74□□□□□ -0.37
Trav6-5A0A075B6B5 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav6-5A0A075B6B5 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Trav6-5A0A075B6B5 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav6-5A0A075B6B5 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav6-5A0A075B6B5 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav6-5A0A075B6B5 Gm27528-202ENSMUST00000222916 2012 ntBASIC12.74□□□□□ -0.37
Trav6-5A0A075B6B5 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Trav6-5A0A075B6B5 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Trav6-5A0A075B6B5 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Trav6-5A0A075B6B5 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC12.74□□□□□ -0.37
Trav6-5A0A075B6B5 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav6-5A0A075B6B5 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC12.73□□□□□ -0.37
Trav6-5A0A075B6B5 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC12.73□□□□□ -0.37
Trav6-5A0A075B6B5 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav6-5A0A075B6B5 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav6-5A0A075B6B5 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav6-5A0A075B6B5 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav6-5A0A075B6B5 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Trav6-5A0A075B6B5 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav6-5A0A075B6B5 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav6-5A0A075B6B5 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Trav6-5A0A075B6B5 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav6-5A0A075B6B5 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Trav6-5A0A075B6B5 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC12.73□□□□□ -0.37
Trav6-5A0A075B6B5 Gm4974-201ENSMUST00000209974 875 ntBASIC12.73□□□□□ -0.37
Trav6-5A0A075B6B5 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav6-5A0A075B6B5 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
Trav6-5A0A075B6B5 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav6-5A0A075B6B5 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav6-5A0A075B6B5 Gm43598-201ENSMUST00000202482 2479 ntBASIC12.73□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 31.3 ms