Protein–RNA interactions for Protein: A0A075B653

Trav16, T cell receptor alpha variable 16 (Fragment), mousemouse

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav16A0A075B653 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav16A0A075B653 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav16A0A075B653 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Trav16A0A075B653 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Trav16A0A075B653 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav16A0A075B653 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC12.74□□□□□ -0.37
Trav16A0A075B653 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Trav16A0A075B653 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC12.74□□□□□ -0.37
Trav16A0A075B653 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC12.74□□□□□ -0.37
Trav16A0A075B653 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC12.74□□□□□ -0.37
Trav16A0A075B653 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC12.74□□□□□ -0.37
Trav16A0A075B653 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC12.74□□□□□ -0.37
Trav16A0A075B653 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav16A0A075B653 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav16A0A075B653 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav16A0A075B653 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav16A0A075B653 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav16A0A075B653 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC12.74□□□□□ -0.37
Trav16A0A075B653 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav16A0A075B653 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav16A0A075B653 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Trav16A0A075B653 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav16A0A075B653 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Trav16A0A075B653 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
Trav16A0A075B653 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC12.73□□□□□ -0.37
Trav16A0A075B653 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav16A0A075B653 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Trav16A0A075B653 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC12.73□□□□□ -0.37
Trav16A0A075B653 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav16A0A075B653 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav16A0A075B653 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav16A0A075B653 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Trav16A0A075B653 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav16A0A075B653 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Trav16A0A075B653 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav16A0A075B653 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC12.73□□□□□ -0.37
Trav16A0A075B653 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav16A0A075B653 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav16A0A075B653 Gm4968-201ENSMUST00000071458 858 ntBASIC12.73□□□□□ -0.37
Trav16A0A075B653 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav16A0A075B653 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Trav16A0A075B653 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Trav16A0A075B653 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Trav16A0A075B653 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav16A0A075B653 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav16A0A075B653 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav16A0A075B653 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav16A0A075B653 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav16A0A075B653 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav16A0A075B653 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav16A0A075B653 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav16A0A075B653 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav16A0A075B653 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Trav16A0A075B653 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Trav16A0A075B653 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav16A0A075B653 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav16A0A075B653 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Trav16A0A075B653 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Trav16A0A075B653 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC12.72□□□□□ -0.37
Trav16A0A075B653 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav16A0A075B653 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav16A0A075B653 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav16A0A075B653 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Trav16A0A075B653 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Trav16A0A075B653 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Trav16A0A075B653 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Trav16A0A075B653 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav16A0A075B653 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Trav16A0A075B653 Gm2559-201ENSMUST00000201323 363 ntBASIC12.72□□□□□ -0.37
Trav16A0A075B653 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav16A0A075B653 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav16A0A075B653 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav16A0A075B653 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav16A0A075B653 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Trav16A0A075B653 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav16A0A075B653 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav16A0A075B653 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Trav16A0A075B653 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav16A0A075B653 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav16A0A075B653 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav16A0A075B653 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC12.71□□□□□ -0.37
Trav16A0A075B653 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav16A0A075B653 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav16A0A075B653 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav16A0A075B653 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav16A0A075B653 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav16A0A075B653 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
Trav16A0A075B653 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav16A0A075B653 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
Trav16A0A075B653 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav16A0A075B653 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav16A0A075B653 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC12.71□□□□□ -0.37
Trav16A0A075B653 AL590614.2-201ENSMUST00000225374 1937 ntBASIC12.71□□□□□ -0.37
Trav16A0A075B653 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav16A0A075B653 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav16A0A075B653 Gm13148-201ENSMUST00000118892 745 ntBASIC12.71□□□□□ -0.37
Trav16A0A075B653 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Trav16A0A075B653 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav16A0A075B653 Mir5133-201ENSMUST00000174955 77 ntBASIC12.71□□□□□ -0.37
Trav16A0A075B653 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 27 ms