Protein–RNA interactions for Protein: A0A075B641

Trav8-1, T cell receptor alpha variable 8-1 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8-1A0A075B641 Tgfbr3-201ENSMUST00000031224 6087 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav8-1A0A075B641 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC11.85□□□□□ -0.51
Trav8-1A0A075B641 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav8-1A0A075B641 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Trav8-1A0A075B641 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC11.84□□□□□ -0.51
Trav8-1A0A075B641 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav8-1A0A075B641 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC11.84□□□□□ -0.51
Trav8-1A0A075B641 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav8-1A0A075B641 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav8-1A0A075B641 Tsc2-205ENSMUST00000226398 5459 ntAPPRIS P2 BASIC11.84□□□□□ -0.51
Trav8-1A0A075B641 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav8-1A0A075B641 Tbl1xr1-203ENSMUST00000193734 8237 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav8-1A0A075B641 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Trav8-1A0A075B641 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC11.84□□□□□ -0.51
Trav8-1A0A075B641 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav8-1A0A075B641 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC11.84□□□□□ -0.51
Trav8-1A0A075B641 Gm13534-201ENSMUST00000121169 513 ntBASIC11.84□□□□□ -0.51
Trav8-1A0A075B641 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC11.84□□□□□ -0.51
Trav8-1A0A075B641 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav8-1A0A075B641 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC11.84□□□□□ -0.51
Trav8-1A0A075B641 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav8-1A0A075B641 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Trav8-1A0A075B641 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav8-1A0A075B641 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Trav8-1A0A075B641 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav8-1A0A075B641 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC11.84□□□□□ -0.51
Trav8-1A0A075B641 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav8-1A0A075B641 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav8-1A0A075B641 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav8-1A0A075B641 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav8-1A0A075B641 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav8-1A0A075B641 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Trav8-1A0A075B641 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav8-1A0A075B641 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.51
Trav8-1A0A075B641 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.51
Trav8-1A0A075B641 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav8-1A0A075B641 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav8-1A0A075B641 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC11.83□□□□□ -0.52
Trav8-1A0A075B641 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav8-1A0A075B641 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav8-1A0A075B641 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav8-1A0A075B641 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav8-1A0A075B641 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav8-1A0A075B641 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Trav8-1A0A075B641 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav8-1A0A075B641 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav8-1A0A075B641 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC11.83□□□□□ -0.52
Trav8-1A0A075B641 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC11.83□□□□□ -0.52
Trav8-1A0A075B641 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav8-1A0A075B641 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav8-1A0A075B641 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav8-1A0A075B641 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav8-1A0A075B641 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
Trav8-1A0A075B641 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav8-1A0A075B641 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav8-1A0A075B641 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Trav8-1A0A075B641 Ino80-201ENSMUST00000049920 6354 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Trav8-1A0A075B641 Asap1-216ENSMUST00000177083 4415 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav8-1A0A075B641 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC11.83□□□□□ -0.52
Trav8-1A0A075B641 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav8-1A0A075B641 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav8-1A0A075B641 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Trav8-1A0A075B641 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav8-1A0A075B641 Dennd5b-201ENSMUST00000111557 9831 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Trav8-1A0A075B641 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
Trav8-1A0A075B641 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav8-1A0A075B641 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav8-1A0A075B641 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC11.82□□□□□ -0.52
Trav8-1A0A075B641 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav8-1A0A075B641 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Trav8-1A0A075B641 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC11.82□□□□□ -0.52
Trav8-1A0A075B641 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Trav8-1A0A075B641 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav8-1A0A075B641 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC11.82□□□□□ -0.52
Trav8-1A0A075B641 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
Trav8-1A0A075B641 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav8-1A0A075B641 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC11.82□□□□□ -0.52
Trav8-1A0A075B641 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC11.82□□□□□ -0.52
Trav8-1A0A075B641 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC11.82□□□□□ -0.52
Trav8-1A0A075B641 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav8-1A0A075B641 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav8-1A0A075B641 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC11.82□□□□□ -0.52
Trav8-1A0A075B641 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC11.82□□□□□ -0.52
Trav8-1A0A075B641 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC11.82□□□□□ -0.52
Trav8-1A0A075B641 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav8-1A0A075B641 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC11.82□□□□□ -0.52
Trav8-1A0A075B641 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Trav8-1A0A075B641 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Trav8-1A0A075B641 Arhgef5-201ENSMUST00000031750 5469 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Trav8-1A0A075B641 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Trav8-1A0A075B641 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC11.82□□□□□ -0.52
Trav8-1A0A075B641 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav8-1A0A075B641 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav8-1A0A075B641 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav8-1A0A075B641 Ptprs-202ENSMUST00000086828 5608 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Trav8-1A0A075B641 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav8-1A0A075B641 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC11.82□□□□□ -0.52
Trav8-1A0A075B641 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav8-1A0A075B641 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Trav8-1A0A075B641 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 51.3 ms