Protein–RNA interactions for Protein: A0A075B634

Trav16n, T cell receptor alpha variable 16n, mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav16nA0A075B634 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Trav16nA0A075B634 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav16nA0A075B634 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav16nA0A075B634 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
Trav16nA0A075B634 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav16nA0A075B634 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav16nA0A075B634 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav16nA0A075B634 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav16nA0A075B634 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav16nA0A075B634 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav16nA0A075B634 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Trav16nA0A075B634 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav16nA0A075B634 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Trav16nA0A075B634 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Trav16nA0A075B634 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav16nA0A075B634 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC12.47□□□□□ -0.41
Trav16nA0A075B634 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
Trav16nA0A075B634 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC12.47□□□□□ -0.41
Trav16nA0A075B634 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Trav16nA0A075B634 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trav16nA0A075B634 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trav16nA0A075B634 AC115863.1-201ENSMUST00000214815 1813 ntBASIC12.46□□□□□ -0.41
Trav16nA0A075B634 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
Trav16nA0A075B634 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trav16nA0A075B634 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trav16nA0A075B634 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trav16nA0A075B634 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trav16nA0A075B634 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trav16nA0A075B634 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC12.46□□□□□ -0.41
Trav16nA0A075B634 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trav16nA0A075B634 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Trav16nA0A075B634 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trav16nA0A075B634 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Trav16nA0A075B634 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trav16nA0A075B634 Gm10849-201ENSMUST00000100397 618 ntBASIC12.46□□□□□ -0.41
Trav16nA0A075B634 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trav16nA0A075B634 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC12.46□□□□□ -0.41
Trav16nA0A075B634 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC12.46□□□□□ -0.41
Trav16nA0A075B634 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trav16nA0A075B634 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trav16nA0A075B634 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
Trav16nA0A075B634 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
Trav16nA0A075B634 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.42
Trav16nA0A075B634 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.42
Trav16nA0A075B634 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Trav16nA0A075B634 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Trav16nA0A075B634 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Trav16nA0A075B634 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Trav16nA0A075B634 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Trav16nA0A075B634 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Trav16nA0A075B634 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Trav16nA0A075B634 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Trav16nA0A075B634 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC12.46□□□□□ -0.42
Trav16nA0A075B634 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Trav16nA0A075B634 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Trav16nA0A075B634 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC12.45□□□□□ -0.42
Trav16nA0A075B634 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav16nA0A075B634 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC12.45□□□□□ -0.42
Trav16nA0A075B634 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav16nA0A075B634 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav16nA0A075B634 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav16nA0A075B634 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC12.45□□□□□ -0.42
Trav16nA0A075B634 Cacng2-201ENSMUST00000019290 5510 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav16nA0A075B634 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC12.45□□□□□ -0.42
Trav16nA0A075B634 Gm42569-201ENSMUST00000200539 472 ntBASIC12.45□□□□□ -0.42
Trav16nA0A075B634 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC12.45□□□□□ -0.42
Trav16nA0A075B634 AC122769.4-201ENSMUST00000228166 901 ntBASIC12.45□□□□□ -0.42
Trav16nA0A075B634 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC12.45□□□□□ -0.42
Trav16nA0A075B634 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav16nA0A075B634 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav16nA0A075B634 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav16nA0A075B634 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav16nA0A075B634 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav16nA0A075B634 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
Trav16nA0A075B634 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav16nA0A075B634 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav16nA0A075B634 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav16nA0A075B634 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav16nA0A075B634 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav16nA0A075B634 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav16nA0A075B634 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav16nA0A075B634 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav16nA0A075B634 Gm21596-201ENSMUST00000178049 1316 ntBASIC12.44□□□□□ -0.42
Trav16nA0A075B634 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC12.44□□□□□ -0.42
Trav16nA0A075B634 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav16nA0A075B634 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC12.44□□□□□ -0.42
Trav16nA0A075B634 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav16nA0A075B634 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav16nA0A075B634 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav16nA0A075B634 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav16nA0A075B634 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav16nA0A075B634 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav16nA0A075B634 AC163280.1-201ENSMUST00000228194 1100 ntBASIC12.44□□□□□ -0.42
Trav16nA0A075B634 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC12.44□□□□□ -0.42
Trav16nA0A075B634 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Trav16nA0A075B634 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Trav16nA0A075B634 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav16nA0A075B634 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Trav16nA0A075B634 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav16nA0A075B634 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 41 ms