Protein–RNA interactions for Protein: A0A075B624

Trav15d-1-dv6d-1, T cell receptor alpha variable 15D-1-DV6D-1 (Fragment), mousemouse

Predictions only

Length 124 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15d-1-dv6d-1A0A075B624 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Trav15d-1-dv6d-1A0A075B624 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trav15d-1-dv6d-1A0A075B624 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Trav15d-1-dv6d-1A0A075B624 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC14□□□□□ -0.17
Trav15d-1-dv6d-1A0A075B624 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC14□□□□□ -0.17
Trav15d-1-dv6d-1A0A075B624 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trav15d-1-dv6d-1A0A075B624 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trav15d-1-dv6d-1A0A075B624 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trav15d-1-dv6d-1A0A075B624 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trav15d-1-dv6d-1A0A075B624 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trav15d-1-dv6d-1A0A075B624 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trav15d-1-dv6d-1A0A075B624 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trav15d-1-dv6d-1A0A075B624 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Trav15d-1-dv6d-1A0A075B624 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav15d-1-dv6d-1A0A075B624 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav15d-1-dv6d-1A0A075B624 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav15d-1-dv6d-1A0A075B624 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Trav15d-1-dv6d-1A0A075B624 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC13.99□□□□□ -0.17
Trav15d-1-dv6d-1A0A075B624 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Trav15d-1-dv6d-1A0A075B624 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav15d-1-dv6d-1A0A075B624 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC13.99□□□□□ -0.17
Trav15d-1-dv6d-1A0A075B624 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Trav15d-1-dv6d-1A0A075B624 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC13.99□□□□□ -0.17
Trav15d-1-dv6d-1A0A075B624 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav15d-1-dv6d-1A0A075B624 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav15d-1-dv6d-1A0A075B624 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav15d-1-dv6d-1A0A075B624 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav15d-1-dv6d-1A0A075B624 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC13.99□□□□□ -0.17
Trav15d-1-dv6d-1A0A075B624 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav15d-1-dv6d-1A0A075B624 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav15d-1-dv6d-1A0A075B624 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Trav15d-1-dv6d-1A0A075B624 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav15d-1-dv6d-1A0A075B624 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Trav15d-1-dv6d-1A0A075B624 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC13.99□□□□□ -0.17
Trav15d-1-dv6d-1A0A075B624 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav15d-1-dv6d-1A0A075B624 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav15d-1-dv6d-1A0A075B624 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav15d-1-dv6d-1A0A075B624 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Trav15d-1-dv6d-1A0A075B624 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
Trav15d-1-dv6d-1A0A075B624 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC13.98□□□□□ -0.17
Trav15d-1-dv6d-1A0A075B624 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Trav15d-1-dv6d-1A0A075B624 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav15d-1-dv6d-1A0A075B624 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Trav15d-1-dv6d-1A0A075B624 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav15d-1-dv6d-1A0A075B624 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Trav15d-1-dv6d-1A0A075B624 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
Trav15d-1-dv6d-1A0A075B624 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC13.98□□□□□ -0.17
Trav15d-1-dv6d-1A0A075B624 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Trav15d-1-dv6d-1A0A075B624 Gm20049-201ENSMUST00000219950 730 ntBASIC13.98□□□□□ -0.17
Trav15d-1-dv6d-1A0A075B624 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Trav15d-1-dv6d-1A0A075B624 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav15d-1-dv6d-1A0A075B624 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav15d-1-dv6d-1A0A075B624 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav15d-1-dv6d-1A0A075B624 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav15d-1-dv6d-1A0A075B624 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav15d-1-dv6d-1A0A075B624 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Trav15d-1-dv6d-1A0A075B624 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav15d-1-dv6d-1A0A075B624 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav15d-1-dv6d-1A0A075B624 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav15d-1-dv6d-1A0A075B624 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav15d-1-dv6d-1A0A075B624 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav15d-1-dv6d-1A0A075B624 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav15d-1-dv6d-1A0A075B624 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav15d-1-dv6d-1A0A075B624 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Trav15d-1-dv6d-1A0A075B624 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav15d-1-dv6d-1A0A075B624 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Trav15d-1-dv6d-1A0A075B624 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Trav15d-1-dv6d-1A0A075B624 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav15d-1-dv6d-1A0A075B624 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav15d-1-dv6d-1A0A075B624 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav15d-1-dv6d-1A0A075B624 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC13.97□□□□□ -0.17
Trav15d-1-dv6d-1A0A075B624 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
Trav15d-1-dv6d-1A0A075B624 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav15d-1-dv6d-1A0A075B624 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC13.97□□□□□ -0.17
Trav15d-1-dv6d-1A0A075B624 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav15d-1-dv6d-1A0A075B624 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav15d-1-dv6d-1A0A075B624 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav15d-1-dv6d-1A0A075B624 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Trav15d-1-dv6d-1A0A075B624 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC13.97□□□□□ -0.17
Trav15d-1-dv6d-1A0A075B624 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav15d-1-dv6d-1A0A075B624 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav15d-1-dv6d-1A0A075B624 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
Trav15d-1-dv6d-1A0A075B624 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav15d-1-dv6d-1A0A075B624 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav15d-1-dv6d-1A0A075B624 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC13.97□□□□□ -0.17
Trav15d-1-dv6d-1A0A075B624 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav15d-1-dv6d-1A0A075B624 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Trav15d-1-dv6d-1A0A075B624 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav15d-1-dv6d-1A0A075B624 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav15d-1-dv6d-1A0A075B624 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trav15d-1-dv6d-1A0A075B624 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trav15d-1-dv6d-1A0A075B624 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trav15d-1-dv6d-1A0A075B624 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC13.96□□□□□ -0.17
Trav15d-1-dv6d-1A0A075B624 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trav15d-1-dv6d-1A0A075B624 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trav15d-1-dv6d-1A0A075B624 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trav15d-1-dv6d-1A0A075B624 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trav15d-1-dv6d-1A0A075B624 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trav15d-1-dv6d-1A0A075B624 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC13.96□□□□□ -0.17
Trav15d-1-dv6d-1A0A075B624 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 44.4 ms