Protein–RNA interactions for Protein: A0A075B621

Trav6n-5, T cell receptor alpha variable 6N-5 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6n-5A0A075B621 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav6n-5A0A075B621 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav6n-5A0A075B621 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav6n-5A0A075B621 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Trav6n-5A0A075B621 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC12.76□□□□□ -0.37
Trav6n-5A0A075B621 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Trav6n-5A0A075B621 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav6n-5A0A075B621 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Trav6n-5A0A075B621 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav6n-5A0A075B621 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav6n-5A0A075B621 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav6n-5A0A075B621 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Trav6n-5A0A075B621 Gm7290-201ENSMUST00000104990 617 ntBASIC12.76□□□□□ -0.37
Trav6n-5A0A075B621 Gm12918-201ENSMUST00000120234 636 ntBASIC12.76□□□□□ -0.37
Trav6n-5A0A075B621 Gm15710-201ENSMUST00000121821 636 ntBASIC12.76□□□□□ -0.37
Trav6n-5A0A075B621 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Trav6n-5A0A075B621 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC12.76□□□□□ -0.37
Trav6n-5A0A075B621 Gm5075-201ENSMUST00000196916 622 ntBASIC12.76□□□□□ -0.37
Trav6n-5A0A075B621 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC12.76□□□□□ -0.37
Trav6n-5A0A075B621 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC12.76□□□□□ -0.37
Trav6n-5A0A075B621 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC12.76□□□□□ -0.37
Trav6n-5A0A075B621 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC12.76□□□□□ -0.37
Trav6n-5A0A075B621 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav6n-5A0A075B621 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav6n-5A0A075B621 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Trav6n-5A0A075B621 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav6n-5A0A075B621 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav6n-5A0A075B621 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav6n-5A0A075B621 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
Trav6n-5A0A075B621 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Trav6n-5A0A075B621 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC12.76□□□□□ -0.37
Trav6n-5A0A075B621 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav6n-5A0A075B621 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Trav6n-5A0A075B621 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Trav6n-5A0A075B621 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav6n-5A0A075B621 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav6n-5A0A075B621 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav6n-5A0A075B621 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Trav6n-5A0A075B621 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Trav6n-5A0A075B621 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
Trav6n-5A0A075B621 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Trav6n-5A0A075B621 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav6n-5A0A075B621 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav6n-5A0A075B621 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Trav6n-5A0A075B621 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav6n-5A0A075B621 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav6n-5A0A075B621 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav6n-5A0A075B621 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav6n-5A0A075B621 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC12.75□□□□□ -0.37
Trav6n-5A0A075B621 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav6n-5A0A075B621 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
Trav6n-5A0A075B621 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav6n-5A0A075B621 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav6n-5A0A075B621 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav6n-5A0A075B621 Gm6365-201ENSMUST00000054711 744 ntBASIC12.75□□□□□ -0.37
Trav6n-5A0A075B621 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
Trav6n-5A0A075B621 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav6n-5A0A075B621 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav6n-5A0A075B621 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Trav6n-5A0A075B621 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav6n-5A0A075B621 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav6n-5A0A075B621 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav6n-5A0A075B621 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav6n-5A0A075B621 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav6n-5A0A075B621 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav6n-5A0A075B621 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Trav6n-5A0A075B621 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Trav6n-5A0A075B621 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Trav6n-5A0A075B621 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav6n-5A0A075B621 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC12.74□□□□□ -0.37
Trav6n-5A0A075B621 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav6n-5A0A075B621 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav6n-5A0A075B621 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Trav6n-5A0A075B621 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav6n-5A0A075B621 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav6n-5A0A075B621 Gm15847-201ENSMUST00000121417 1065 ntBASIC12.74□□□□□ -0.37
Trav6n-5A0A075B621 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC12.74□□□□□ -0.37
Trav6n-5A0A075B621 Gm6211-202ENSMUST00000167849 925 ntBASIC12.74□□□□□ -0.37
Trav6n-5A0A075B621 Gm17661-201ENSMUST00000170317 270 ntBASIC12.74□□□□□ -0.37
Trav6n-5A0A075B621 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
Trav6n-5A0A075B621 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav6n-5A0A075B621 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav6n-5A0A075B621 Mtag2-201ENSMUST00000058665 714 ntBASIC12.74□□□□□ -0.37
Trav6n-5A0A075B621 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav6n-5A0A075B621 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Trav6n-5A0A075B621 Eml5-210ENSMUST00000223282 7595 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Trav6n-5A0A075B621 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav6n-5A0A075B621 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav6n-5A0A075B621 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav6n-5A0A075B621 Gm27528-202ENSMUST00000222916 2012 ntBASIC12.74□□□□□ -0.37
Trav6n-5A0A075B621 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Trav6n-5A0A075B621 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Trav6n-5A0A075B621 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Trav6n-5A0A075B621 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC12.74□□□□□ -0.37
Trav6n-5A0A075B621 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav6n-5A0A075B621 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC12.73□□□□□ -0.37
Trav6n-5A0A075B621 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC12.73□□□□□ -0.37
Trav6n-5A0A075B621 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav6n-5A0A075B621 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav6n-5A0A075B621 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 20.1 ms