Protein–RNA interactions for Protein: A0A075B5Z8

Trav6-1, T cell receptor alpha variable 6-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-1A0A075B5Z8 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav6-1A0A075B5Z8 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC13.22□□□□□ -0.29
Trav6-1A0A075B5Z8 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav6-1A0A075B5Z8 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav6-1A0A075B5Z8 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Trav6-1A0A075B5Z8 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav6-1A0A075B5Z8 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC13.22□□□□□ -0.29
Trav6-1A0A075B5Z8 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Trav6-1A0A075B5Z8 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Trav6-1A0A075B5Z8 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Trav6-1A0A075B5Z8 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC13.21□□□□□ -0.29
Trav6-1A0A075B5Z8 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC13.21□□□□□ -0.29
Trav6-1A0A075B5Z8 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
Trav6-1A0A075B5Z8 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav6-1A0A075B5Z8 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav6-1A0A075B5Z8 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
Trav6-1A0A075B5Z8 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav6-1A0A075B5Z8 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav6-1A0A075B5Z8 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
Trav6-1A0A075B5Z8 Gm15378-201ENSMUST00000121894 207 ntBASIC13.21□□□□□ -0.29
Trav6-1A0A075B5Z8 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC13.21□□□□□ -0.29
Trav6-1A0A075B5Z8 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav6-1A0A075B5Z8 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav6-1A0A075B5Z8 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
Trav6-1A0A075B5Z8 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC13.21□□□□□ -0.29
Trav6-1A0A075B5Z8 Actl10-202ENSMUST00000226583 1501 ntBASIC13.21□□□□□ -0.29
Trav6-1A0A075B5Z8 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav6-1A0A075B5Z8 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Trav6-1A0A075B5Z8 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav6-1A0A075B5Z8 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC13.21□□□□□ -0.29
Trav6-1A0A075B5Z8 Gfra2-202ENSMUST00000227633 1480 ntBASIC13.21□□□□□ -0.3
Trav6-1A0A075B5Z8 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Trav6-1A0A075B5Z8 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Trav6-1A0A075B5Z8 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Trav6-1A0A075B5Z8 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Trav6-1A0A075B5Z8 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.3
Trav6-1A0A075B5Z8 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Trav6-1A0A075B5Z8 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Trav6-1A0A075B5Z8 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.3
Trav6-1A0A075B5Z8 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Trav6-1A0A075B5Z8 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Trav6-1A0A075B5Z8 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Trav6-1A0A075B5Z8 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.3
Trav6-1A0A075B5Z8 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Trav6-1A0A075B5Z8 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav6-1A0A075B5Z8 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav6-1A0A075B5Z8 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav6-1A0A075B5Z8 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav6-1A0A075B5Z8 Gm42473-201ENSMUST00000201056 2291 ntBASIC13.2□□□□□ -0.3
Trav6-1A0A075B5Z8 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav6-1A0A075B5Z8 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav6-1A0A075B5Z8 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Trav6-1A0A075B5Z8 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Trav6-1A0A075B5Z8 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav6-1A0A075B5Z8 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav6-1A0A075B5Z8 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC13.2□□□□□ -0.3
Trav6-1A0A075B5Z8 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC13.2□□□□□ -0.3
Trav6-1A0A075B5Z8 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC13.2□□□□□ -0.3
Trav6-1A0A075B5Z8 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Trav6-1A0A075B5Z8 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
Trav6-1A0A075B5Z8 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav6-1A0A075B5Z8 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav6-1A0A075B5Z8 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Trav6-1A0A075B5Z8 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav6-1A0A075B5Z8 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav6-1A0A075B5Z8 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav6-1A0A075B5Z8 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav6-1A0A075B5Z8 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav6-1A0A075B5Z8 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav6-1A0A075B5Z8 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Trav6-1A0A075B5Z8 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav6-1A0A075B5Z8 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav6-1A0A075B5Z8 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav6-1A0A075B5Z8 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav6-1A0A075B5Z8 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav6-1A0A075B5Z8 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav6-1A0A075B5Z8 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC13.19□□□□□ -0.3
Trav6-1A0A075B5Z8 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC13.19□□□□□ -0.3
Trav6-1A0A075B5Z8 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Trav6-1A0A075B5Z8 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav6-1A0A075B5Z8 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav6-1A0A075B5Z8 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Trav6-1A0A075B5Z8 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav6-1A0A075B5Z8 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav6-1A0A075B5Z8 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav6-1A0A075B5Z8 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav6-1A0A075B5Z8 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Trav6-1A0A075B5Z8 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
Trav6-1A0A075B5Z8 AC154855.1-201ENSMUST00000227353 1458 ntBASIC13.19□□□□□ -0.3
Trav6-1A0A075B5Z8 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav6-1A0A075B5Z8 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Trav6-1A0A075B5Z8 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav6-1A0A075B5Z8 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav6-1A0A075B5Z8 Gm12085-201ENSMUST00000119263 940 ntBASIC13.19□□□□□ -0.3
Trav6-1A0A075B5Z8 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC13.19□□□□□ -0.3
Trav6-1A0A075B5Z8 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav6-1A0A075B5Z8 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC13.19□□□□□ -0.3
Trav6-1A0A075B5Z8 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav6-1A0A075B5Z8 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
Trav6-1A0A075B5Z8 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 19.6 ms