Protein–RNA interactions for Protein: A0A075B5I2

Trbv4, T cell receptor beta, variable 10 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv4A0A075B5I2 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trbv4A0A075B5I2 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
Trbv4A0A075B5I2 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trbv4A0A075B5I2 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trbv4A0A075B5I2 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trbv4A0A075B5I2 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trbv4A0A075B5I2 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Trbv4A0A075B5I2 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trbv4A0A075B5I2 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trbv4A0A075B5I2 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC16.48■□□□□ 0.23
Trbv4A0A075B5I2 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trbv4A0A075B5I2 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trbv4A0A075B5I2 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trbv4A0A075B5I2 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trbv4A0A075B5I2 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Trbv4A0A075B5I2 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Trbv4A0A075B5I2 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trbv4A0A075B5I2 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Trbv4A0A075B5I2 Gm15442-201ENSMUST00000117905 1527 ntBASIC16.47■□□□□ 0.23
Trbv4A0A075B5I2 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC16.47■□□□□ 0.23
Trbv4A0A075B5I2 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
Trbv4A0A075B5I2 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC16.47■□□□□ 0.23
Trbv4A0A075B5I2 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
Trbv4A0A075B5I2 Gm18101-201ENSMUST00000215769 548 ntBASIC16.47■□□□□ 0.23
Trbv4A0A075B5I2 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trbv4A0A075B5I2 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
Trbv4A0A075B5I2 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Trbv4A0A075B5I2 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
Trbv4A0A075B5I2 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Trbv4A0A075B5I2 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trbv4A0A075B5I2 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC16.47■□□□□ 0.23
Trbv4A0A075B5I2 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Trbv4A0A075B5I2 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trbv4A0A075B5I2 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trbv4A0A075B5I2 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Trbv4A0A075B5I2 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
Trbv4A0A075B5I2 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Trbv4A0A075B5I2 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trbv4A0A075B5I2 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trbv4A0A075B5I2 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trbv4A0A075B5I2 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
Trbv4A0A075B5I2 Gm14464-201ENSMUST00000119658 1254 ntBASIC16.46■□□□□ 0.23
Trbv4A0A075B5I2 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC16.46■□□□□ 0.23
Trbv4A0A075B5I2 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Trbv4A0A075B5I2 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
Trbv4A0A075B5I2 Gm37722-201ENSMUST00000193757 208 ntBASIC16.46■□□□□ 0.23
Trbv4A0A075B5I2 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trbv4A0A075B5I2 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trbv4A0A075B5I2 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
Trbv4A0A075B5I2 Gm18032-201ENSMUST00000222541 538 ntBASIC16.46■□□□□ 0.23
Trbv4A0A075B5I2 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
Trbv4A0A075B5I2 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trbv4A0A075B5I2 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trbv4A0A075B5I2 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC16.46■□□□□ 0.23
Trbv4A0A075B5I2 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trbv4A0A075B5I2 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trbv4A0A075B5I2 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trbv4A0A075B5I2 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trbv4A0A075B5I2 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trbv4A0A075B5I2 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trbv4A0A075B5I2 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
Trbv4A0A075B5I2 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC16.45■□□□□ 0.22
Trbv4A0A075B5I2 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trbv4A0A075B5I2 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Trbv4A0A075B5I2 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC16.45■□□□□ 0.22
Trbv4A0A075B5I2 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
Trbv4A0A075B5I2 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trbv4A0A075B5I2 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trbv4A0A075B5I2 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trbv4A0A075B5I2 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trbv4A0A075B5I2 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trbv4A0A075B5I2 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trbv4A0A075B5I2 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trbv4A0A075B5I2 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Trbv4A0A075B5I2 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
Trbv4A0A075B5I2 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC16.45■□□□□ 0.22
Trbv4A0A075B5I2 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Trbv4A0A075B5I2 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
Trbv4A0A075B5I2 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Trbv4A0A075B5I2 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trbv4A0A075B5I2 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Trbv4A0A075B5I2 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Trbv4A0A075B5I2 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC16.45■□□□□ 0.22
Trbv4A0A075B5I2 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Trbv4A0A075B5I2 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trbv4A0A075B5I2 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
Trbv4A0A075B5I2 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Trbv4A0A075B5I2 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trbv4A0A075B5I2 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trbv4A0A075B5I2 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC16.45■□□□□ 0.22
Trbv4A0A075B5I2 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Trbv4A0A075B5I2 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trbv4A0A075B5I2 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trbv4A0A075B5I2 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Trbv4A0A075B5I2 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trbv4A0A075B5I2 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
Trbv4A0A075B5I2 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Trbv4A0A075B5I2 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trbv4A0A075B5I2 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Trbv4A0A075B5I2 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 26.9 ms